CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = E1252X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31252E1252XE2070XnonsynGaaTaa18170.9444446473-6475
ORF1ab/nsp31252E1252XE2070XnonsynGaATaG1810.05555566473-6475

Details of the mutation E1252X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31252E1252XGaaTaa1718All0.000003
ORF1ab/nsp31252E1252XGaATaG118All0
ORF1ab/nsp31252E1252XGaaTaa55B.10.000046
ORF1ab/nsp31252E1252XGaaTaa22B.1.10.000036
ORF1ab/nsp31252E1252XGaaTaa22B.1.1.70.000002
ORF1ab/nsp31252E1252XGaaTaa22B.1.1770.000026
ORF1ab/nsp31252E1252XGaaTaa22B.1.20.000018
ORF1ab/nsp31252E1252XGaaTaa11A.30.002096
ORF1ab/nsp31252E1252XGaATaG11AY.1030.000006
ORF1ab/nsp31252E1252XGaaTaa11AY.230.00007
ORF1ab/nsp31252E1252XGaaTaa11B.1.177.310.011494
ORF1ab/nsp31252E1252XGaaTaa11C.350.000774