CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 736 | D736D | D1554D | syn | gaC | gaT | 17370 | 17370 | 1 | 4925-4927 |
Details of the mutation D736D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 17370 | 17370 | All | 0.003322 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 10667 | 10667 | AY.99.2 | 0.983043 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1053 | 1053 | AY.46 | 0.109596 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1034 | 1034 | B.1.1.7 | 0.000926 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 527 | 527 | AY.4 | 0.00082 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 279 | 279 | AY.44 | 0.001698 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 277 | 277 | B.1.177 | 0.003647 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 266 | 266 | B.1.617.2 | 0.001002 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 208 | 208 | AY.43 | 0.000922 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 197 | 197 | B.1.234 | 0.025993 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 169 | 169 | B.1.1.521 | 0.903743 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 153 | 153 | P.1 | 0.00241 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 135 | 135 | B.1 | 0.001237 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 118 | 118 | AY.3 | 0.001174 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 118 | 118 | B.1.2 | 0.001039 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 117 | 117 | AY.3.1 | 0.009975 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 96 | 96 | AY.25 | 0.000577 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 69 | 69 | B.1.1 | 0.001252 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 66 | 66 | B.1.628 | 0.023256 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 65 | 65 | AY.103 | 0.000404 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 57 | 57 | AY.26 | 0.001614 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 57 | 57 | B.1.1.274 | 0.287879 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 51 | 51 | B.1.160 | 0.001591 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 51 | 51 | B.1.221 | 0.003623 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 50 | 50 | AY.4.2 | 0.001084 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 41 | 41 | B.1.349 | 0.029307 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 40 | 40 | B.1.637 | 0.002923 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 38 | 38 | AY.20 | 0.001477 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 38 | 38 | P.1.9 | 0.182692 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 31 | 31 | B.1.243 | 0.002157 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 31 | 31 | B.1.429 | 0.000729 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 30 | 30 | AY.23 | 0.002092 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 30 | 30 | B.1.177.21 | 0.002294 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 29 | 29 | AY.102 | 0.000769 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 29 | 29 | AY.119 | 0.001024 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 29 | 29 | AY.31 | 0.537037 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 28 | 28 | B.1.1.384 | 0.666667 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 28 | 28 | B.1.1.519 | 0.001112 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 26 | 26 | P.1.14 | 0.001243 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 25 | 25 | B.1.526 | 0.000588 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 23 | 23 | B.1.1.216 | 0.020481 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 22 | 22 | AY.33 | 0.001469 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 21 | 21 | AY.100 | 0.000966 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 20 | 20 | AY.29.1 | 0.00441 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 20 | 20 | AY.6 | 0.000823 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 19 | 19 | AY.98.1 | 0.00092 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 19 | 19 | B.1.517 | 0.008113 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 18 | 18 | B.1.177.81 | 0.003408 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 17 | 17 | P.1.10 | 0.004581 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 16 | 16 | B.1.160.30 | 0.047619 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 15 | 15 | AY.5 | 0.00031 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 15 | 15 | B.1.1.177 | 0.288462 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 15 | 15 | B.1.1.214 | 0.000832 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 15 | 15 | B.1.177.5 | 0.018634 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 14 | 14 | AY.118 | 0.000877 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 14 | 14 | AY.74 | 0.001619 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 14 | 14 | B.1.1.277 | 0.010622 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 14 | 14 | B.1.258 | 0.000932 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 13 | 13 | AY.45 | 0.001582 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 13 | 13 | AY.46.6 | 0.000939 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 13 | 13 | AY.77 | 0.014656 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 13 | 13 | AZ.1 | 0.011275 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 13 | 13 | C.37 | 0.001509 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 12 | 12 | AY.12 | 0.003793 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 12 | 12 | AY.39 | 0.000297 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 12 | 12 | AY.4.4 | 0.00491 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 12 | 12 | AY.47 | 0.000373 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 11 | 11 | AY.29 | 0.000174 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 11 | 11 | AY.5.3 | 0.003711 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 10 | 10 | B.1.1.74 | 0.043103 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 10 | 10 | B.1.351.2 | 0.003026 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 9 | 9 | AY.9.2 | 0.000331 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 9 | 9 | B.1.351 | 0.000268 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | AY.120.2.1 | 0.003986 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | AY.14 | 0.000704 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | AY.2 | 0.002849 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | AY.75 | 0.000448 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | B.1.367 | 0.006339 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | B.1.621 | 0.000708 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | P.1.15 | 0.001859 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 7 | 7 | B.1.1.218 | 0.053846 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 7 | 7 | B.1.1.222 | 0.001428 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 7 | 7 | B.1.1.50 | 0.004752 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 7 | 7 | B.1.214 | 0.025641 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | AY.27 | 0.000388 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | AY.4.2.1 | 0.000894 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | AY.46.4 | 0.000987 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | AY.84 | 0.002625 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | B.1.36.29 | 0.003104 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 6 | 6 | B.1.8 | 0.011834 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | AY.110 | 0.000563 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | AY.113 | 0.000712 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | AY.121 | 0.000677 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | AY.32 | 0.002662 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | AY.92 | 0.001436 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | B.1.1.317 | 0.002058 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | B.1.177.30 | 0.012563 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | B.1.177.57 | 0.001405 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | B.1.362 | 0.007704 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 5 | 5 | P.1.17 | 0.000809 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | A.2 | 0.002647 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | AY.105 | 0.002572 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | AY.91.1 | 0.01626 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B | 0.000511 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.1.187 | 0.035398 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.1.25 | 0.002274 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.1.297 | 0.008949 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.177.60 | 0.000874 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.177.7 | 0.000659 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.1.595 | 0.001044 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | B.32 | 0.108108 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 4 | 4 | P.1.7 | 0.001277 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.46.3 | 0.002801 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.46.5 | 0.000595 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.51 | 0.002727 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.263 | 0.004673 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.416 | 0.002715 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.448 | 0.006098 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.453 | 0.025424 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.462 | 0.025862 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.1.526 | 0.010638 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.147 | 0.002268 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.177.70 | 0.017751 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.177.8 | 0.002257 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.3 | 0.007853 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.470 | 0.004213 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.527 | 0.011111 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.576 | 0.00272 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | B.1.619 | 0.002613 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | N.10 | 0.088235 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 3 | 3 | U.2 | 0.026316 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.1.139 | 0.045455 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.1.368 | 0.006173 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.111 | 0.00235 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.258.11 | 0.000793 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.258.3 | 0.00335 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.279 | 0.001027 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.280 | 0.014286 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.332 | 0.006993 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.340 | 0.008584 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.425 | 0.005988 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.537 | 0.04 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | C.16 | 0.002121 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | A.2.3 | 0.004739 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.83 | 0.001724 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.12 | 0.007463 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.16 | 0.055556 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.227 | 0.004348 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.27 | 0.00565 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.288 | 0.001916 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.1.417 | 0.002703 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.160.29 | 0.004219 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.34 | 0.052632 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.61 | 0.043478 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.187 | 0.033333 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.258.22 | 0.002667 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.258.24 | 0.010753 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.281 | 0.021739 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.500 | 0.052632 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.548 | 0.035714 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | W.4 | 0.001351 |
ORF1ab/nsp3 | 736 | D736D | gaC | gaT | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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