CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D729Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3729D729YD1547YnonsynGatTat2815281514904-4906

Details of the mutation D729Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3729D729YGatTat28152815All0.000538
ORF1ab/nsp3729D729YGatTat686686B.1.1.70.000614
ORF1ab/nsp3729D729YGatTat429429AY.430.001901
ORF1ab/nsp3729D729YGatTat239239AY.30.002377
ORF1ab/nsp3729D729YGatTat143143AY.40.000223
ORF1ab/nsp3729D729YGatTat123123B.1.617.20.000463
ORF1ab/nsp3729D729YGatTat7171AY.1030.000441
ORF1ab/nsp3729D729YGatTat6666B.1.5521
ORF1ab/nsp3729D729YGatTat6363P.10.000993
ORF1ab/nsp3729D729YGatTat5959AY.440.000359
ORF1ab/nsp3729D729YGatTat4949AY.270.003171
ORF1ab/nsp3729D729YGatTat4747B.1.160.160.04368
ORF1ab/nsp3729D729YGatTat4646AY.1020.00122
ORF1ab/nsp3729D729YGatTat4242AY.690.00784
ORF1ab/nsp3729D729YGatTat4242B.1.20.00037
ORF1ab/nsp3729D729YGatTat3333B.10.000302
ORF1ab/nsp3729D729YGatTat2929AY.250.000174
ORF1ab/nsp3729D729YGatTat2929B.1.4780.341176
ORF1ab/nsp3729D729YGatTat2626AY.46.60.001877
ORF1ab/nsp3729D729YGatTat2525AY.260.000708
ORF1ab/nsp3729D729YGatTat2323AY.390.000568
ORF1ab/nsp3729D729YGatTat2323B.1.177.320.031039
ORF1ab/nsp3729D729YGatTat2121B.1.10.000381
ORF1ab/nsp3729D729YGatTat2020AY.1000.00092
ORF1ab/nsp3729D729YGatTat1919AY.1200.000706
ORF1ab/nsp3729D729YGatTat1818AY.330.001202
ORF1ab/nsp3729D729YGatTat1616B.1.3510.000476
ORF1ab/nsp3729D729YGatTat1313AY.3.10.001108
ORF1ab/nsp3729D729YGatTat1313B.1.2580.000865
ORF1ab/nsp3729D729YGatTat1212B.1.110.30.008621
ORF1ab/nsp3729D729YGatTat1212B.1.5960.001046
ORF1ab/nsp3729D729YGatTat1111AY.620.004793
ORF1ab/nsp3729D729YGatTat1111B.1.4290.000259
ORF1ab/nsp3729D729YGatTat1010B.1.177.810.001893
ORF1ab/nsp3729D729YGatTat1010B.1.6370.000731
ORF1ab/nsp3729D729YGatTat1010P.1.140.000478
ORF1ab/nsp3729D729YGatTat99AY.1210.001218
ORF1ab/nsp3729D729YGatTat99AY.200.00035
ORF1ab/nsp3729D729YGatTat99AY.470.00028
ORF1ab/nsp3729D729YGatTat99AY.9.20.000331
ORF1ab/nsp3729D729YGatTat88B.1.177.120.001214
ORF1ab/nsp3729D729YGatTat88B.1.177.540.004851
ORF1ab/nsp3729D729YGatTat77AY.340.000679
ORF1ab/nsp3729D729YGatTat77AY.98.10.000339
ORF1ab/nsp3729D729YGatTat77D.20.000525
ORF1ab/nsp3729D729YGatTat66AY.1110.001099
ORF1ab/nsp3729D729YGatTat66AZ.20.004926
ORF1ab/nsp3729D729YGatTat66B.1.160.140.012712
ORF1ab/nsp3729D729YGatTat66B.1.1770.000079
ORF1ab/nsp3729D729YGatTat55AY.1180.000313
ORF1ab/nsp3729D729YGatTat55AY.4.20.000108
ORF1ab/nsp3729D729YGatTat55AY.610.000524
ORF1ab/nsp3729D729YGatTat55B.1.1.3170.002058
ORF1ab/nsp3729D729YGatTat55B.1.3560.008636
ORF1ab/nsp3729D729YGatTat55B.1.5260.000118
ORF1ab/nsp3729D729YGatTat44AY.1130.00057
ORF1ab/nsp3729D729YGatTat44AY.420.000161
ORF1ab/nsp3729D729YGatTat44AY.450.000487
ORF1ab/nsp3729D729YGatTat44AY.9.10.000335
ORF1ab/nsp3729D729YGatTat44B.1.1.2140.000222
ORF1ab/nsp3729D729YGatTat44B.1.1600.000125
ORF1ab/nsp3729D729YGatTat44B.1.258.170.000416
ORF1ab/nsp3729D729YGatTat33AY.1190.000106
ORF1ab/nsp3729D729YGatTat33AY.460.000312
ORF1ab/nsp3729D729YGatTat33AY.50.000062
ORF1ab/nsp3729D729YGatTat33AY.80.001818
ORF1ab/nsp3729D729YGatTat33AY.99.20.000276
ORF1ab/nsp3729D729YGatTat33B.1.1.2160.002671
ORF1ab/nsp3729D729YGatTat33B.1.1.3020.006224
ORF1ab/nsp3729D729YGatTat33B.1.2210.000213
ORF1ab/nsp3729D729YGatTat33B.1.258.30.005025
ORF1ab/nsp3729D729YGatTat33B.1.3910.003382
ORF1ab/nsp3729D729YGatTat33B.1.4270.000151
ORF1ab/nsp3729D729YGatTat33N.50.0053
ORF1ab/nsp3729D729YGatTat33P.1.70.000958
ORF1ab/nsp3729D729YGatTat33Q.10.000379
ORF1ab/nsp3729D729YGatTat22A.23.10.001408
ORF1ab/nsp3729D729YGatTat22AY.10.000791
ORF1ab/nsp3729D729YGatTat22AY.290.000032
ORF1ab/nsp3729D729YGatTat22AY.39.1.10.001449
ORF1ab/nsp3729D729YGatTat22AY.4.50.000215
ORF1ab/nsp3729D729YGatTat22AY.60.000082
ORF1ab/nsp3729D729YGatTat22AY.750.000112
ORF1ab/nsp3729D729YGatTat22AY.75.10.000361
ORF1ab/nsp3729D729YGatTat22AY.790.002421
ORF1ab/nsp3729D729YGatTat22AY.930.000546
ORF1ab/nsp3729D729YGatTat22AY.980.000158
ORF1ab/nsp3729D729YGatTat22B.1.1.1890.003026
ORF1ab/nsp3729D729YGatTat22B.1.1.2220.000408
ORF1ab/nsp3729D729YGatTat22B.1.1.2690.002706
ORF1ab/nsp3729D729YGatTat22B.1.1.280.000622
ORF1ab/nsp3729D729YGatTat22B.1.1.3060.000877
ORF1ab/nsp3729D729YGatTat22B.1.1.330.000842
ORF1ab/nsp3729D729YGatTat22B.1.1.500.001358
ORF1ab/nsp3729D729YGatTat22B.1.1.5170.013605
ORF1ab/nsp3729D729YGatTat22B.1.1.5190.000079
ORF1ab/nsp3729D729YGatTat22B.1.160.250.022222
ORF1ab/nsp3729D729YGatTat22B.1.177.600.000437
ORF1ab/nsp3729D729YGatTat22B.1.1890.008584
ORF1ab/nsp3729D729YGatTat22B.1.2430.000139
ORF1ab/nsp3729D729YGatTat22B.1.360.000292
ORF1ab/nsp3729D729YGatTat22B.1.6190.001742
ORF1ab/nsp3729D729YGatTat22B.1.930.001867
ORF1ab/nsp3729D729YGatTat22B.400.000729
ORF1ab/nsp3729D729YGatTat22C.360.001821
ORF1ab/nsp3729D729YGatTat22P.20.000373
ORF1ab/nsp3729D729YGatTat11A.2.50.000499
ORF1ab/nsp3729D729YGatTat11A.270.001656
ORF1ab/nsp3729D729YGatTat11AP.10.001502
ORF1ab/nsp3729D729YGatTat11AT.10.005128
ORF1ab/nsp3729D729YGatTat11AY.1040.001984
ORF1ab/nsp3729D729YGatTat11AY.1070.000466
ORF1ab/nsp3729D729YGatTat11AY.1140.000231
ORF1ab/nsp3729D729YGatTat11AY.1170.000085
ORF1ab/nsp3729D729YGatTat11AY.140.000088
ORF1ab/nsp3729D729YGatTat11AY.150.002222
ORF1ab/nsp3729D729YGatTat11AY.190.00114
ORF1ab/nsp3729D729YGatTat11AY.230.00007
ORF1ab/nsp3729D729YGatTat11AY.29.10.000221
ORF1ab/nsp3729D729YGatTat11AY.360.000148
ORF1ab/nsp3729D729YGatTat11AY.4.2.10.000149
ORF1ab/nsp3729D729YGatTat11AY.46.20.000635
ORF1ab/nsp3729D729YGatTat11AY.480.000465
ORF1ab/nsp3729D729YGatTat11AY.530.000288
ORF1ab/nsp3729D729YGatTat11AY.580.000907
ORF1ab/nsp3729D729YGatTat11AY.630.000387
ORF1ab/nsp3729D729YGatTat11AY.680.000274
ORF1ab/nsp3729D729YGatTat11AY.830.001724
ORF1ab/nsp3729D729YGatTat11AY.880.000884
ORF1ab/nsp3729D729YGatTat11B0.000128
ORF1ab/nsp3729D729YGatTat11B.1.1.1340.011364
ORF1ab/nsp3729D729YGatTat11B.1.1.1610.003534
ORF1ab/nsp3729D729YGatTat11B.1.1.2510.007937
ORF1ab/nsp3729D729YGatTat11B.1.1.2790.001121
ORF1ab/nsp3729D729YGatTat11B.1.1.2820.011628
ORF1ab/nsp3729D729YGatTat11B.1.1.2840.000107
ORF1ab/nsp3729D729YGatTat11B.1.1.2860.002899
ORF1ab/nsp3729D729YGatTat11B.1.1.3160.000925
ORF1ab/nsp3729D729YGatTat11B.1.1.3260.001761
ORF1ab/nsp3729D729YGatTat11B.1.1.3970.002252
ORF1ab/nsp3729D729YGatTat11B.1.1.4480.002033
ORF1ab/nsp3729D729YGatTat11B.1.1.4660.008696
ORF1ab/nsp3729D729YGatTat11B.1.1470.000756
ORF1ab/nsp3729D729YGatTat11B.1.160.230.004831
ORF1ab/nsp3729D729YGatTat11B.1.177.160.000664
ORF1ab/nsp3729D729YGatTat11B.1.177.210.000076
ORF1ab/nsp3729D729YGatTat11B.1.177.860.000183
ORF1ab/nsp3729D729YGatTat11B.1.1990.004132
ORF1ab/nsp3729D729YGatTat11B.1.2100.002132
ORF1ab/nsp3729D729YGatTat11B.1.2340.000132
ORF1ab/nsp3729D729YGatTat11B.1.2360.002053
ORF1ab/nsp3729D729YGatTat11B.1.2410.000812
ORF1ab/nsp3729D729YGatTat11B.1.258.110.000396
ORF1ab/nsp3729D729YGatTat11B.1.2790.000514
ORF1ab/nsp3729D729YGatTat11B.1.3290.000608
ORF1ab/nsp3729D729YGatTat11B.1.36.170.000494
ORF1ab/nsp3729D729YGatTat11B.1.3670.000792
ORF1ab/nsp3729D729YGatTat11B.1.3710.001122
ORF1ab/nsp3729D729YGatTat11B.1.3810.007812
ORF1ab/nsp3729D729YGatTat11B.1.3990.001934
ORF1ab/nsp3729D729YGatTat11B.1.4410.009615
ORF1ab/nsp3729D729YGatTat11B.1.4480.002625
ORF1ab/nsp3729D729YGatTat11B.1.4590.004082
ORF1ab/nsp3729D729YGatTat11B.1.466.20.000391
ORF1ab/nsp3729D729YGatTat11B.1.5650.00081
ORF1ab/nsp3729D729YGatTat11B.1.5950.000261
ORF1ab/nsp3729D729YGatTat11B.1.617.10.000129
ORF1ab/nsp3729D729YGatTat11B.1.6210.000089
ORF1ab/nsp3729D729YGatTat11B.1.6220.012987
ORF1ab/nsp3729D729YGatTat11B.3.10.001658
ORF1ab/nsp3729D729YGatTat11B.610.005747
ORF1ab/nsp3729D729YGatTat11C.36.30.000567
ORF1ab/nsp3729D729YGatTat11C.370.000116
ORF1ab/nsp3729D729YGatTat11P.1.170.000162
ORF1ab/nsp3729D729YGatTat11P.1.20.001156