CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D339X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3339D339XD1157XnonsynGaCTaA630.53734-3736
ORF1ab/nsp3339D339XD1157XnonsynGACTGA620.3333333734-3736
ORF1ab/nsp3339D339XD1157XnonsynGaCTaG610.1666673734-3736

Details of the mutation D339X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3339D339XGaCTaA36All0.000001
ORF1ab/nsp3339D339XGACTGA26All0
ORF1ab/nsp3339D339XGaCTaG16All0
ORF1ab/nsp3339D339XGaCTaA24B.1.10.000036
ORF1ab/nsp3339D339XGACTGA24B.1.10.000036
ORF1ab/nsp3339D339XGaCTaG110.055556
ORF1ab/nsp3339D339XGaCTaA11B.1.2210.000071