CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D271del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3271D271del2D1089del2delgATg--320.6666673530-3532
ORF1ab/nsp3271D271del2D1089del2delGAT--N310.3333333530-3532

Details of the mutation D271del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3271D271del2gATg--23All0
ORF1ab/nsp3271D271del2GAT--N13All0
ORF1ab/nsp3271D271del2gATg--11B.1.1.70.000001
ORF1ab/nsp3271D271del2gATg--11B.1.20.000009
ORF1ab/nsp3271D271del2GAT--N11P.10.000016