CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1875del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31875D1875del1D2693del1delGac-ac950.5555568342-8344
ORF1ab/nsp31875D1875del1D2693del1delgACg-N910.1111118342-8344
ORF1ab/nsp31875D1875del1D2693del1delGAC-NN910.1111118342-8344
ORF1ab/nsp31875D1875del1D2693del1delgACg-T910.1111118342-8344
ORF1ab/nsp31875D1875del1D2693del1delgAcg-c910.1111118342-8344

Details of the mutation D1875del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31875D1875del1Gac-ac59All0.000001
ORF1ab/nsp31875D1875del1gAcg-c19All0
ORF1ab/nsp31875D1875del1gACg-N19All0
ORF1ab/nsp31875D1875del1GAC-NN19All0
ORF1ab/nsp31875D1875del1gACg-T19All0
ORF1ab/nsp31875D1875del1gAcg-c12B.10.000009
ORF1ab/nsp31875D1875del1gACg-T12B.10.000009
ORF1ab/nsp31875D1875del1Gac-ac11A0.000387
ORF1ab/nsp31875D1875del1Gac-ac11AY.430.000004
ORF1ab/nsp31875D1875del1Gac-ac11AY.660.00107
ORF1ab/nsp31875D1875del1gACg-N11B.1.1.70.000001
ORF1ab/nsp31875D1875del1Gac-ac11B.1.36.290.000517
ORF1ab/nsp31875D1875del1Gac-ac11B.1.617.20.000004
ORF1ab/nsp31875D1875del1GAC-NN11P.10.000016