CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1875Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31875D1875YD2693YnonsynGacTac88850.9659098342-8344
ORF1ab/nsp31875D1875YD2693YnonsynGaCTaT8830.03409098342-8344

Details of the mutation D1875Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31875D1875YGacTac8588All0.000016
ORF1ab/nsp31875D1875YGaCTaT388All0.000001
ORF1ab/nsp31875D1875YGacTac2727B.1.1.70.000024
ORF1ab/nsp31875D1875YGacTac99AZ.20.007389
ORF1ab/nsp31875D1875YGacTac99B.10.000082
ORF1ab/nsp31875D1875YGacTac45B.1.617.20.000015
ORF1ab/nsp31875D1875YGaCTaT15B.1.617.20.000004
ORF1ab/nsp31875D1875YGacTac34D.20.000225
ORF1ab/nsp31875D1875YGaCTaT14D.20.000075
ORF1ab/nsp31875D1875YGacTac33AY.40.000005
ORF1ab/nsp31875D1875YGacTac33B.1.10.000054
ORF1ab/nsp31875D1875YGacTac22AY.230.000139
ORF1ab/nsp31875D1875YGacTac22AY.23.10.000835
ORF1ab/nsp31875D1875YGaCTaT12AY.430.000004
ORF1ab/nsp31875D1875YGacTac12AY.430.000004
ORF1ab/nsp31875D1875YGacTac22B.1.1.390.001019
ORF1ab/nsp31875D1875YGacTac22B.1.20.000018
ORF1ab/nsp31875D1875YGacTac11A.20.000662
ORF1ab/nsp31875D1875YGacTac11A.2.40.003367
ORF1ab/nsp31875D1875YGacTac11AY.1030.000006
ORF1ab/nsp31875D1875YGacTac11AY.1100.000113
ORF1ab/nsp31875D1875YGacTac11AY.250.000006
ORF1ab/nsp31875D1875YGacTac11AY.930.000273
ORF1ab/nsp31875D1875YGacTac11B0.000128
ORF1ab/nsp31875D1875YGacTac11B.1.1.250.000569
ORF1ab/nsp31875D1875YGacTac11B.1.1580.02381
ORF1ab/nsp31875D1875YGacTac11B.1.1600.000031
ORF1ab/nsp31875D1875YGacTac11B.1.160.70.002079
ORF1ab/nsp31875D1875YGacTac11B.1.1770.000013
ORF1ab/nsp31875D1875YGacTac11B.1.2340.000132
ORF1ab/nsp31875D1875YGacTac11B.1.2360.002053
ORF1ab/nsp31875D1875YGacTac11B.1.2790.000514
ORF1ab/nsp31875D1875YGacTac11B.1.5960.000087
ORF1ab/nsp31875D1875YGacTac11C.36.30.000567
ORF1ab/nsp31875D1875YGacTac11P.1.170.000162