CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1774Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31774D1774YD2592YnonsynGatTat3273150.9633038039-8041
ORF1ab/nsp31774D1774YD2592YnonsynGaTTaC327120.03669728039-8041

Details of the mutation D1774Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31774D1774YGatTat315327All0.00006
ORF1ab/nsp31774D1774YGaTTaC12327All0.000002
ORF1ab/nsp31774D1774YGatTat6366B.10.000577
ORF1ab/nsp31774D1774YGaTTaC366B.10.000027
ORF1ab/nsp31774D1774YGatTat5050AY.40.000078
ORF1ab/nsp31774D1774YGatTat4141B.1.617.20.000154
ORF1ab/nsp31774D1774YGatTat1818AY.1200.000669
ORF1ab/nsp31774D1774YGatTat1616AY.1000.000736
ORF1ab/nsp31774D1774YGatTat1313C.36.3.10.035326
ORF1ab/nsp31774D1774YGatTat811AY.430.000035
ORF1ab/nsp31774D1774YGaTTaC311AY.430.000013
ORF1ab/nsp31774D1774YGatTat1010AY.99.20.000922
ORF1ab/nsp31774D1774YGatTat99AY.160.003417
ORF1ab/nsp31774D1774YGatTat99AY.440.000055
ORF1ab/nsp31774D1774YGatTat88AY.30.00008
ORF1ab/nsp31774D1774YGatTat88B.1.1.70.000007
ORF1ab/nsp31774D1774YGatTat77AY.1020.000186
ORF1ab/nsp31774D1774YGatTat66AY.1030.000037
ORF1ab/nsp31774D1774YGatTat66B.1.5960.000523
ORF1ab/nsp31774D1774YGatTat44AY.1180.000251
ORF1ab/nsp31774D1774YGaTTaC24AY.420.00008
ORF1ab/nsp31774D1774YGatTat24AY.420.00008
ORF1ab/nsp31774D1774YGatTat44B.1.177.100.003512
ORF1ab/nsp31774D1774YGatTat33AY.290.000047
ORF1ab/nsp31774D1774YGatTat33AY.460.000312
ORF1ab/nsp31774D1774YGatTat33AY.90.000203
ORF1ab/nsp31774D1774YGatTat12A0.000387
ORF1ab/nsp31774D1774YGaTTaC12A0.000387
ORF1ab/nsp31774D1774YGatTat22AY.250.000012
ORF1ab/nsp31774D1774YGatTat12AY.520.000814
ORF1ab/nsp31774D1774YGaTTaC12AY.520.000814
ORF1ab/nsp31774D1774YGatTat12B0.000128
ORF1ab/nsp31774D1774YGaTTaC12B0.000128
ORF1ab/nsp31774D1774YGatTat22B.1.10.000036
ORF1ab/nsp31774D1774YGatTat22B.1.2430.000139
ORF1ab/nsp31774D1774YGatTat12B.1.6230.000536
ORF1ab/nsp31774D1774YGaTTaC12B.1.6230.000536
ORF1ab/nsp31774D1774YGatTat11AY.1190.000035
ORF1ab/nsp31774D1774YGatTat11AY.1210.000135
ORF1ab/nsp31774D1774YGatTat11AY.20.000356
ORF1ab/nsp31774D1774YGatTat11AY.260.000028
ORF1ab/nsp31774D1774YGatTat11AY.4.40.000409
ORF1ab/nsp31774D1774YGatTat11AY.50.000021
ORF1ab/nsp31774D1774YGatTat11AY.530.000288
ORF1ab/nsp31774D1774YGatTat11AY.98.10.000048
ORF1ab/nsp31774D1774YGatTat11B.1.1.1440.028571
ORF1ab/nsp31774D1774YGatTat11B.1.1.330.000421
ORF1ab/nsp31774D1774YGatTat11B.1.1.3480.000796
ORF1ab/nsp31774D1774YGatTat11B.1.1.700.000341
ORF1ab/nsp31774D1774YGatTat11B.1.2060.000816
ORF1ab/nsp31774D1774YGatTat11B.1.6210.000089