CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1478del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31478D1478delD2296deldelGAT---10910917151-7153

Details of the mutation D1478del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31478D1478delGAT---109109All0.000021
ORF1ab/nsp31478D1478delGAT---2828B.1.1.70.000025
ORF1ab/nsp31478D1478delGAT---88B.1.1770.000105
ORF1ab/nsp31478D1478delGAT---77B.10.000064
ORF1ab/nsp31478D1478delGAT---440.222222
ORF1ab/nsp31478D1478delGAT---44AY.40.000006
ORF1ab/nsp31478D1478delGAT---44B.1.1.2180.030769
ORF1ab/nsp31478D1478delGAT---33B.1.10.000054
ORF1ab/nsp31478D1478delGAT---33B.1.617.20.000011
ORF1ab/nsp31478D1478delGAT---22AY.4.50.000215
ORF1ab/nsp31478D1478delGAT---22AY.430.000009
ORF1ab/nsp31478D1478delGAT---22B.1.177.620.002384
ORF1ab/nsp31478D1478delGAT---22B.1.4110.007407
ORF1ab/nsp31478D1478delGAT---22B.1.5960.000174
ORF1ab/nsp31478D1478delGAT---22C.350.001548
ORF1ab/nsp31478D1478delGAT---11AD.20.000219
ORF1ab/nsp31478D1478delGAT---11AY.1010.00049
ORF1ab/nsp31478D1478delGAT---11AY.1030.000006
ORF1ab/nsp31478D1478delGAT---11AY.1080.001103
ORF1ab/nsp31478D1478delGAT---11AY.1190.000035
ORF1ab/nsp31478D1478delGAT---11AY.1200.000037
ORF1ab/nsp31478D1478delGAT---11AY.250.000006
ORF1ab/nsp31478D1478delGAT---11AY.30.00001
ORF1ab/nsp31478D1478delGAT---11AY.360.000148
ORF1ab/nsp31478D1478delGAT---11AY.4.30.000842
ORF1ab/nsp31478D1478delGAT---11AY.590.00053
ORF1ab/nsp31478D1478delGAT---11AY.600.000938
ORF1ab/nsp31478D1478delGAT---11AY.660.00107
ORF1ab/nsp31478D1478delGAT---11AY.670.000464
ORF1ab/nsp31478D1478delGAT---11AY.840.000437
ORF1ab/nsp31478D1478delGAT---11AY.90.000068
ORF1ab/nsp31478D1478delGAT---11AY.990.001049
ORF1ab/nsp31478D1478delGAT---11B.1.1.370.000193
ORF1ab/nsp31478D1478delGAT---11B.1.1.460.004367
ORF1ab/nsp31478D1478delGAT---11B.1.1.4640.001473
ORF1ab/nsp31478D1478delGAT---11B.1.1.5250.005464
ORF1ab/nsp31478D1478delGAT---11B.1.1.700.000341
ORF1ab/nsp31478D1478delGAT---11B.1.177.530.002392
ORF1ab/nsp31478D1478delGAT---11B.1.177.60.000977
ORF1ab/nsp31478D1478delGAT---11B.1.177.90.001332
ORF1ab/nsp31478D1478delGAT---11B.1.20.000009
ORF1ab/nsp31478D1478delGAT---11B.1.2210.000071
ORF1ab/nsp31478D1478delGAT---11B.1.2580.000067
ORF1ab/nsp31478D1478delGAT---11B.1.2650.001271
ORF1ab/nsp31478D1478delGAT---11B.1.416.10.001563
ORF1ab/nsp31478D1478delGAT---11B.1.5260.000024
ORF1ab/nsp31478D1478delGAT---11B.1.5330.009615
ORF1ab/nsp31478D1478delGAT---11B.1.5770.000687
ORF1ab/nsp31478D1478delGAT---11B.1.6210.000089
ORF1ab/nsp31478D1478delGAT---11P.10.000016
ORF1ab/nsp31478D1478delGAT---11P.1.150.000232