CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1283D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31283D1283DD2101DsyngaCgaT8694869416566-6568

Details of the mutation D1283D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31283D1283DgaCgaT86948694All0.001663
ORF1ab/nsp31283D1283DgaCgaT50335033Q.30.729949
ORF1ab/nsp31283D1283DgaCgaT799799B.1.1.70.000715
ORF1ab/nsp31283D1283DgaCgaT697697AY.40.001085
ORF1ab/nsp31283D1283DgaCgaT257257B.1.4290.006047
ORF1ab/nsp31283D1283DgaCgaT217217B.1.617.20.000817
ORF1ab/nsp31283D1283DgaCgaT117117B.1.1770.001541
ORF1ab/nsp31283D1283DgaCgaT102102AY.1000.004693
ORF1ab/nsp31283D1283DgaCgaT101101P.10.001591
ORF1ab/nsp31283D1283DgaCgaT7171B.1.1.5190.002819
ORF1ab/nsp31283D1283DgaCgaT6161B.10.000559
ORF1ab/nsp31283D1283DgaCgaT5858B.1.20.000511
ORF1ab/nsp31283D1283DgaCgaT5858B.1.36.360.034919
ORF1ab/nsp31283D1283DgaCgaT5757AY.1030.000354
ORF1ab/nsp31283D1283DgaCgaT5050B.1.5260.001175
ORF1ab/nsp31283D1283DgaCgaT4343AY.250.000259
ORF1ab/nsp31283D1283DgaCgaT4343AY.430.000191
ORF1ab/nsp31283D1283DgaCgaT3939B.1.10.000707
ORF1ab/nsp31283D1283DgaCgaT3939B.1.2580.002595
ORF1ab/nsp31283D1283DgaCgaT3838AY.1020.001008
ORF1ab/nsp31283D1283DgaCgaT3838B.1.1600.001185
ORF1ab/nsp31283D1283DgaCgaT3535AY.200.00136
ORF1ab/nsp31283D1283DgaCgaT3030AY.230.002092
ORF1ab/nsp31283D1283DgaCgaT2424AY.46.50.004762
ORF1ab/nsp31283D1283DgaCgaT2323AY.440.00014
ORF1ab/nsp31283D1283DgaCgaT2222P.20.004106
ORF1ab/nsp31283D1283DgaCgaT2121B.1.177.810.003976
ORF1ab/nsp31283D1283DgaCgaT2121P.1.140.001004
ORF1ab/nsp31283D1283DgaCgaT2020B.1.5960.001743
ORF1ab/nsp31283D1283DgaCgaT1818AY.390.000445
ORF1ab/nsp31283D1283DgaCgaT1818B.1.2430.001253
ORF1ab/nsp31283D1283DgaCgaT1717AY.30.000169
ORF1ab/nsp31283D1283DgaCgaT1717AY.420.000684
ORF1ab/nsp31283D1283DgaCgaT1717B.1.221.20.068273
ORF1ab/nsp31283D1283DgaCgaT1616AY.150.035556
ORF1ab/nsp31283D1283DgaCgaT1616C.370.001857
ORF1ab/nsp31283D1283DgaCgaT1515AY.340.001454
ORF1ab/nsp31283D1283DgaCgaT1515B.1.177.600.003277
ORF1ab/nsp31283D1283DgaCgaT1414Q.80.002309
ORF1ab/nsp31283D1283DgaCgaT1313AY.750.000728
ORF1ab/nsp31283D1283DgaCgaT1313AY.830.022414
ORF1ab/nsp31283D1283DgaCgaT1111AY.470.000342
ORF1ab/nsp31283D1283DgaCgaT1111B.1.1.1471
ORF1ab/nsp31283D1283DgaCgaT1111B.1.1.1590.051402
ORF1ab/nsp31283D1283DgaCgaT1111B.1.3510.000327
ORF1ab/nsp31283D1283DgaCgaT99AY.50.000186
ORF1ab/nsp31283D1283DgaCgaT99B.1.360.001313
ORF1ab/nsp31283D1283DgaCgaT88AY.1050.005145
ORF1ab/nsp31283D1283DgaCgaT88AY.330.000534
ORF1ab/nsp31283D1283DgaCgaT88AY.4.20.000174
ORF1ab/nsp31283D1283DgaCgaT77AY.1210.000947
ORF1ab/nsp31283D1283DgaCgaT77AY.260.000198
ORF1ab/nsp31283D1283DgaCgaT77B.1.2400.001509
ORF1ab/nsp31283D1283DgaCgaT77B.1.3110.001922
ORF1ab/nsp31283D1283DgaCgaT77B.1.6370.000512
ORF1ab/nsp31283D1283DgaCgaT66AY.290.000095
ORF1ab/nsp31283D1283DgaCgaT66AY.60.000247
ORF1ab/nsp31283D1283DgaCgaT66B.1.1.2140.000333
ORF1ab/nsp31283D1283DgaCgaT66B.1.3460.007864
ORF1ab/nsp31283D1283DgaCgaT66B.1.36.220.007246
ORF1ab/nsp31283D1283DgaCgaT66N.50.010601
ORF1ab/nsp31283D1283DgaCgaT55AY.1190.000177
ORF1ab/nsp31283D1283DgaCgaT55AY.98.10.000242
ORF1ab/nsp31283D1283DgaCgaT55B.1.1.3760.029762
ORF1ab/nsp31283D1283DgaCgaT55B.1.2060.004078
ORF1ab/nsp31283D1283DgaCgaT55B.1.2340.00066
ORF1ab/nsp31283D1283DgaCgaT55B.1.5820.002453
ORF1ab/nsp31283D1283DgaCgaT55B.400.001821
ORF1ab/nsp31283D1283DgaCgaT55D.20.000375
ORF1ab/nsp31283D1283DgaCgaT44AY.1200.000149
ORF1ab/nsp31283D1283DgaCgaT44AY.39.10.000158
ORF1ab/nsp31283D1283DgaCgaT44AY.930.001092
ORF1ab/nsp31283D1283DgaCgaT44B.1.1.3180.001207
ORF1ab/nsp31283D1283DgaCgaT44B.1.4270.000202
ORF1ab/nsp31283D1283DgaCgaT33AD.20.000657
ORF1ab/nsp31283D1283DgaCgaT33AY.120.10.000963
ORF1ab/nsp31283D1283DgaCgaT33AY.450.000365
ORF1ab/nsp31283D1283DgaCgaT33AY.46.40.000494
ORF1ab/nsp31283D1283DgaCgaT33AY.90.000203
ORF1ab/nsp31283D1283DgaCgaT33AY.99.20.000276
ORF1ab/nsp31283D1283DgaCgaT33B.1.177.570.000843
ORF1ab/nsp31283D1283DgaCgaT33B.1.177.70.000495
ORF1ab/nsp31283D1283DgaCgaT33B.1.466.20.001174
ORF1ab/nsp31283D1283DgaCgaT33B.1.5090.002597
ORF1ab/nsp31283D1283DgaCgaT33B.1.5300.021429
ORF1ab/nsp31283D1283DgaCgaT33B.1.5760.00272
ORF1ab/nsp31283D1283DgaCgaT33Q.10.000379
ORF1ab/nsp31283D1283DgaCgaT22A.190.018868
ORF1ab/nsp31283D1283DgaCgaT22AY.1040.003968
ORF1ab/nsp31283D1283DgaCgaT22AY.1170.000169
ORF1ab/nsp31283D1283DgaCgaT22AY.160.000759
ORF1ab/nsp31283D1283DgaCgaT22AY.240.000862
ORF1ab/nsp31283D1283DgaCgaT22AY.460.000208
ORF1ab/nsp31283D1283DgaCgaT22AY.530.000575
ORF1ab/nsp31283D1283DgaCgaT22AY.610.00021
ORF1ab/nsp31283D1283DgaCgaT22AY.9.10.000167
ORF1ab/nsp31283D1283DgaCgaT22AY.9.20.000073
ORF1ab/nsp31283D1283DgaCgaT22B.1.1.1090.08
ORF1ab/nsp31283D1283DgaCgaT22B.1.1.3890.012121
ORF1ab/nsp31283D1283DgaCgaT22B.1.1.4090.005666
ORF1ab/nsp31283D1283DgaCgaT22B.1.177.100.001756
ORF1ab/nsp31283D1283DgaCgaT22B.1.177.650.001331
ORF1ab/nsp31283D1283DgaCgaT22B.1.36.170.000988
ORF1ab/nsp31283D1283DgaCgaT22B.1.4160.002538
ORF1ab/nsp31283D1283DgaCgaT22B.1.5680.002222
ORF1ab/nsp31283D1283DgaCgaT22B.1.5730.012195
ORF1ab/nsp31283D1283DgaCgaT22B.1.5950.000522
ORF1ab/nsp31283D1283DgaCgaT22B.1.6000.011696
ORF1ab/nsp31283D1283DgaCgaT22B.1.6090.000959
ORF1ab/nsp31283D1283DgaCgaT22B.1.6230.001073
ORF1ab/nsp31283D1283DgaCgaT22C.80.008929
ORF1ab/nsp31283D1283DgaCgaT22P.1.120.000968
ORF1ab/nsp31283D1283DgaCgaT22P.1.170.000324
ORF1ab/nsp31283D1283DgaCgaT22Q.40.00091
ORF1ab/nsp31283D1283DgaCgaT11A.10.000282
ORF1ab/nsp31283D1283DgaCgaT11AL.10.012987
ORF1ab/nsp31283D1283DgaCgaT11AY.1160.000287
ORF1ab/nsp31283D1283DgaCgaT11AY.1180.000063
ORF1ab/nsp31283D1283DgaCgaT11AY.120.2.10.000498
ORF1ab/nsp31283D1283DgaCgaT11AY.130.000161
ORF1ab/nsp31283D1283DgaCgaT11AY.16.10.00047
ORF1ab/nsp31283D1283DgaCgaT11AY.300.000396
ORF1ab/nsp31283D1283DgaCgaT11AY.34.10.00051
ORF1ab/nsp31283D1283DgaCgaT11AY.4.10.000737
ORF1ab/nsp31283D1283DgaCgaT11AY.4.30.000842
ORF1ab/nsp31283D1283DgaCgaT11AY.5.30.000337
ORF1ab/nsp31283D1283DgaCgaT11AY.5.40.000277
ORF1ab/nsp31283D1283DgaCgaT11AY.540.000095
ORF1ab/nsp31283D1283DgaCgaT11AY.550.000917
ORF1ab/nsp31283D1283DgaCgaT11AY.590.00053
ORF1ab/nsp31283D1283DgaCgaT11AY.740.000116
ORF1ab/nsp31283D1283DgaCgaT11AY.75.10.00018
ORF1ab/nsp31283D1283DgaCgaT11AY.820.001357
ORF1ab/nsp31283D1283DgaCgaT11AY.850.000427
ORF1ab/nsp31283D1283DgaCgaT11AY.870.000833
ORF1ab/nsp31283D1283DgaCgaT11AY.910.00073
ORF1ab/nsp31283D1283DgaCgaT11AY.950.000761
ORF1ab/nsp31283D1283DgaCgaT11AY.980.000079
ORF1ab/nsp31283D1283DgaCgaT11B0.000128
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.10.000327
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1180.010204
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1720.018182
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1920.002309
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1980.001468
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.250.000569
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2630.001558
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3170.000412
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.330.000421
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3660.015873
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3690.000446
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.390.00051
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.4120.007634
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.4340.000349
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.4480.002033
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.460.004367
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.5250.005464
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.700.000341
ORF1ab/nsp31283D1283DgaCgaT11B.1.1110.001175
ORF1ab/nsp31283D1283DgaCgaT11B.1.1260.001276
ORF1ab/nsp31283D1283DgaCgaT11B.1.1280.000635
ORF1ab/nsp31283D1283DgaCgaT11B.1.160.160.000929
ORF1ab/nsp31283D1283DgaCgaT11B.1.177.210.000076
ORF1ab/nsp31283D1283DgaCgaT11B.1.177.320.00135
ORF1ab/nsp31283D1283DgaCgaT11B.1.177.620.001192
ORF1ab/nsp31283D1283DgaCgaT11B.1.2370.004975
ORF1ab/nsp31283D1283DgaCgaT11B.1.258.170.000104
ORF1ab/nsp31283D1283DgaCgaT11B.1.2980.002114
ORF1ab/nsp31283D1283DgaCgaT11B.1.36.290.000517
ORF1ab/nsp31283D1283DgaCgaT11B.1.36.80.001
ORF1ab/nsp31283D1283DgaCgaT11B.1.4090.000781
ORF1ab/nsp31283D1283DgaCgaT11B.1.4390.005917
ORF1ab/nsp31283D1283DgaCgaT11B.1.4560.003268
ORF1ab/nsp31283D1283DgaCgaT11B.1.4710.002732
ORF1ab/nsp31283D1283DgaCgaT11B.1.4990.00105
ORF1ab/nsp31283D1283DgaCgaT11B.1.5010.007353
ORF1ab/nsp31283D1283DgaCgaT11B.1.5580.004566
ORF1ab/nsp31283D1283DgaCgaT11B.1.5640.000426
ORF1ab/nsp31283D1283DgaCgaT11B.1.5750.000303
ORF1ab/nsp31283D1283DgaCgaT11B.1.5800.004065
ORF1ab/nsp31283D1283DgaCgaT11B.1.5880.00091
ORF1ab/nsp31283D1283DgaCgaT11B.1.6180.004032
ORF1ab/nsp31283D1283DgaCgaT11B.1.6200.000946
ORF1ab/nsp31283D1283DgaCgaT11B.1.6210.000089
ORF1ab/nsp31283D1283DgaCgaT11B.1.6340.003425
ORF1ab/nsp31283D1283DgaCgaT11C.180.002591
ORF1ab/nsp31283D1283DgaCgaT11C.350.000774
ORF1ab/nsp31283D1283DgaCgaT11N.40.004255
ORF1ab/nsp31283D1283DgaCgaT11P.1.150.000232
ORF1ab/nsp31283D1283DgaCgaT11P.1.70.000319
ORF1ab/nsp31283D1283DgaCgaT11R.10.00009