CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1242E

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31242D1242ED2060EnonsyngaCgaA95910.9578956443-6445
ORF1ab/nsp31242D1242ED2060EnonsyngaCgaG9540.04210536443-6445

Details of the mutation D1242E within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31242D1242EgaCgaA9195All0.000017
ORF1ab/nsp31242D1242EgaCgaG495All0.000001
ORF1ab/nsp31242D1242EgaCgaA6262AY.250.000373
ORF1ab/nsp31242D1242EgaCgaG24AY.40.000003
ORF1ab/nsp31242D1242EgaCgaA24AY.40.000003
ORF1ab/nsp31242D1242EgaCgaA44B.1.20.000035
ORF1ab/nsp31242D1242EgaCgaA44B.1.2580.000266
ORF1ab/nsp31242D1242EgaCgaG24B.1.617.20.000008
ORF1ab/nsp31242D1242EgaCgaA24B.1.617.20.000008
ORF1ab/nsp31242D1242EgaCgaA22AY.260.000057
ORF1ab/nsp31242D1242EgaCgaA22AY.440.000012
ORF1ab/nsp31242D1242EgaCgaA22AY.75.10.000361
ORF1ab/nsp31242D1242EgaCgaA22B.1.1.70.000002
ORF1ab/nsp31242D1242EgaCgaA11AY.30.00001
ORF1ab/nsp31242D1242EgaCgaA11AY.390.000025
ORF1ab/nsp31242D1242EgaCgaA11AY.570.000656
ORF1ab/nsp31242D1242EgaCgaA11B.1.1.250.000569
ORF1ab/nsp31242D1242EgaCgaA11B.1.1.700.000341
ORF1ab/nsp31242D1242EgaCgaA11B.1.3490.000715
ORF1ab/nsp31242D1242EgaCgaA11B.1.36.310.001751
ORF1ab/nsp31242D1242EgaCgaA11B.1.4220.000812
ORF1ab/nsp31242D1242EgaCgaA11B.1.438.10.000107