CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = D1242D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31242D1242DD2060DsyngaCgaT5025502516443-6445

Details of the mutation D1242D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31242D1242DgaCgaT50255025All0.000961
ORF1ab/nsp31242D1242DgaCgaT10241024B.1.1.2770.776935
ORF1ab/nsp31242D1242DgaCgaT706706B.1.617.20.002658
ORF1ab/nsp31242D1242DgaCgaT544544AY.430.00241
ORF1ab/nsp31242D1242DgaCgaT448448B.1.1.70.000401
ORF1ab/nsp31242D1242DgaCgaT289289B.1.3980.860119
ORF1ab/nsp31242D1242DgaCgaT162162K.31
ORF1ab/nsp31242D1242DgaCgaT161161AY.250.000968
ORF1ab/nsp31242D1242DgaCgaT114114B.10.001044
ORF1ab/nsp31242D1242DgaCgaT103103B.1.1.5190.00409
ORF1ab/nsp31242D1242DgaCgaT9797AY.30.000965
ORF1ab/nsp31242D1242DgaCgaT8989B.1.1.260.465969
ORF1ab/nsp31242D1242DgaCgaT8787AY.40.000135
ORF1ab/nsp31242D1242DgaCgaT8787B.1.5880.079163
ORF1ab/nsp31242D1242DgaCgaT6565B.1.10.001179
ORF1ab/nsp31242D1242DgaCgaT6565B.1.5690.942029
ORF1ab/nsp31242D1242DgaCgaT6262AY.1030.000385
ORF1ab/nsp31242D1242DgaCgaT6161B.1.2340.008049
ORF1ab/nsp31242D1242DgaCgaT6060AY.440.000365
ORF1ab/nsp31242D1242DgaCgaT4444B.1.5960.003834
ORF1ab/nsp31242D1242DgaCgaT4242AY.1000.001932
ORF1ab/nsp31242D1242DgaCgaT4141AY.390.001013
ORF1ab/nsp31242D1242DgaCgaT4141B.1.4290.000965
ORF1ab/nsp31242D1242DgaCgaT3636AY.4.20.000781
ORF1ab/nsp31242D1242DgaCgaT3434A.2.50.016966
ORF1ab/nsp31242D1242DgaCgaT3333AY.420.001328
ORF1ab/nsp31242D1242DgaCgaT3232B.1.1.2840.003437
ORF1ab/nsp31242D1242DgaCgaT2323B.1.258.170.002391
ORF1ab/nsp31242D1242DgaCgaT2121AY.640.0125
ORF1ab/nsp31242D1242DgaCgaT2121B.1.360.003064
ORF1ab/nsp31242D1242DgaCgaT1414AY.200.000544
ORF1ab/nsp31242D1242DgaCgaT1414B.1.6370.001023
ORF1ab/nsp31242D1242DgaCgaT1313B.1.5260.000306
ORF1ab/nsp31242D1242DgaCgaT1313B.1.6210.001151
ORF1ab/nsp31242D1242DgaCgaT1212AY.260.00034
ORF1ab/nsp31242D1242DgaCgaT1212C.340.444444
ORF1ab/nsp31242D1242DgaCgaT1111AY.50.000227
ORF1ab/nsp31242D1242DgaCgaT1010AY.750.00056
ORF1ab/nsp31242D1242DgaCgaT99AY.1170.000761
ORF1ab/nsp31242D1242DgaCgaT99AY.60.00037
ORF1ab/nsp31242D1242DgaCgaT99B.1.1770.000119
ORF1ab/nsp31242D1242DgaCgaT99B.1.2210.000639
ORF1ab/nsp31242D1242DgaCgaT99B.1.5950.002349
ORF1ab/nsp31242D1242DgaCgaT99P.10.000142
ORF1ab/nsp31242D1242DgaCgaT88AY.1190.000282
ORF1ab/nsp31242D1242DgaCgaT88AY.230.000558
ORF1ab/nsp31242D1242DgaCgaT88AY.460.000833
ORF1ab/nsp31242D1242DgaCgaT88AY.5.40.002214
ORF1ab/nsp31242D1242DgaCgaT88B.1.1600.00025
ORF1ab/nsp31242D1242DgaCgaT88B.1.177.540.004851
ORF1ab/nsp31242D1242DgaCgaT88B.1.20.00007
ORF1ab/nsp31242D1242DgaCgaT88B.1.4270.000404
ORF1ab/nsp31242D1242DgaCgaT66AY.1210.000812
ORF1ab/nsp31242D1242DgaCgaT66B.1.1.3180.001811
ORF1ab/nsp31242D1242DgaCgaT55AY.470.000156
ORF1ab/nsp31242D1242DgaCgaT55B.1.1490.017123
ORF1ab/nsp31242D1242DgaCgaT55B.1.160.280.01462
ORF1ab/nsp31242D1242DgaCgaT55B.1.4520.068493
ORF1ab/nsp31242D1242DgaCgaT55B.1.5250.000566
ORF1ab/nsp31242D1242DgaCgaT55C.370.00058
ORF1ab/nsp31242D1242DgaCgaT55P.1.140.000239
ORF1ab/nsp31242D1242DgaCgaT44AY.1100.000451
ORF1ab/nsp31242D1242DgaCgaT44AY.1160.001147
ORF1ab/nsp31242D1242DgaCgaT44AY.360.000593
ORF1ab/nsp31242D1242DgaCgaT44AY.450.000487
ORF1ab/nsp31242D1242DgaCgaT44AY.670.001857
ORF1ab/nsp31242D1242DgaCgaT44B.1.1.250.002274
ORF1ab/nsp31242D1242DgaCgaT44B.1.177.40.000844
ORF1ab/nsp31242D1242DgaCgaT44B.1.177.580.005326
ORF1ab/nsp31242D1242DgaCgaT44B.1.2580.000266
ORF1ab/nsp31242D1242DgaCgaT33AY.1200.000112
ORF1ab/nsp31242D1242DgaCgaT33AY.120.2.10.001495
ORF1ab/nsp31242D1242DgaCgaT33AY.290.000047
ORF1ab/nsp31242D1242DgaCgaT33AY.330.0002
ORF1ab/nsp31242D1242DgaCgaT33AY.410.000882
ORF1ab/nsp31242D1242DgaCgaT33AY.46.40.000494
ORF1ab/nsp31242D1242DgaCgaT33AY.910.002191
ORF1ab/nsp31242D1242DgaCgaT33B0.000383
ORF1ab/nsp31242D1242DgaCgaT33B.1.1.100.003344
ORF1ab/nsp31242D1242DgaCgaT33B.1.1.2140.000166
ORF1ab/nsp31242D1242DgaCgaT33B.1.177.70.000495
ORF1ab/nsp31242D1242DgaCgaT33B.1.617.10.000387
ORF1ab/nsp31242D1242DgaCgaT33P.1.70.000958
ORF1ab/nsp31242D1242DgaCgaT22AY.1020.000053
ORF1ab/nsp31242D1242DgaCgaT22AY.1130.000285
ORF1ab/nsp31242D1242DgaCgaT22AY.1140.000462
ORF1ab/nsp31242D1242DgaCgaT22AY.90.000135
ORF1ab/nsp31242D1242DgaCgaT22AY.98.10.000097
ORF1ab/nsp31242D1242DgaCgaT22AY.990.002099
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.2400.00939
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.280.000622
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.3160.00185
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.3260.003521
ORF1ab/nsp31242D1242DgaCgaT22B.1.2430.000139
ORF1ab/nsp31242D1242DgaCgaT22B.1.3960.001411
ORF1ab/nsp31242D1242DgaCgaT22B.1.4090.001563
ORF1ab/nsp31242D1242DgaCgaT22B.1.438.10.000215
ORF1ab/nsp31242D1242DgaCgaT22B.1.4800.004975
ORF1ab/nsp31242D1242DgaCgaT22B.1.5750.000607
ORF1ab/nsp31242D1242DgaCgaT22B.130.090909
ORF1ab/nsp31242D1242DgaCgaT22D.20.00015
ORF1ab/nsp31242D1242DgaCgaT22K.10.047619
ORF1ab/nsp31242D1242DgaCgaT11A.20.000662
ORF1ab/nsp31242D1242DgaCgaT11A.2.5.10.004808
ORF1ab/nsp31242D1242DgaCgaT11AD.20.000219
ORF1ab/nsp31242D1242DgaCgaT11AY.1010.00049
ORF1ab/nsp31242D1242DgaCgaT11AY.1050.000643
ORF1ab/nsp31242D1242DgaCgaT11AY.1110.000183
ORF1ab/nsp31242D1242DgaCgaT11AY.120.10.000321
ORF1ab/nsp31242D1242DgaCgaT11AY.340.000097
ORF1ab/nsp31242D1242DgaCgaT11AY.39.10.00004
ORF1ab/nsp31242D1242DgaCgaT11AY.4.50.000107
ORF1ab/nsp31242D1242DgaCgaT11AY.46.50.000198
ORF1ab/nsp31242D1242DgaCgaT11AY.520.000814
ORF1ab/nsp31242D1242DgaCgaT11AY.580.000907
ORF1ab/nsp31242D1242DgaCgaT11AY.610.000105
ORF1ab/nsp31242D1242DgaCgaT11AY.70.000196
ORF1ab/nsp31242D1242DgaCgaT11AY.710.000475
ORF1ab/nsp31242D1242DgaCgaT11AY.890.004902
ORF1ab/nsp31242D1242DgaCgaT11AY.9.10.000084
ORF1ab/nsp31242D1242DgaCgaT11AY.9.20.000037
ORF1ab/nsp31242D1242DgaCgaT11AY.920.000287
ORF1ab/nsp31242D1242DgaCgaT11AY.980.000079
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.1640.005155
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.1890.001513
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.2940.001266
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.3120.001912
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.3720.000689
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.4320.001266
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.4350.034483
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.500.000679
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.5170.006803
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.5250.005464
ORF1ab/nsp31242D1242DgaCgaT11B.1.120.008
ORF1ab/nsp31242D1242DgaCgaT11B.1.130.002375
ORF1ab/nsp31242D1242DgaCgaT11B.1.160.240.004425
ORF1ab/nsp31242D1242DgaCgaT11B.1.2400.000216
ORF1ab/nsp31242D1242DgaCgaT11B.1.2670.018519
ORF1ab/nsp31242D1242DgaCgaT11B.1.3400.004292
ORF1ab/nsp31242D1242DgaCgaT11B.1.3510.00003
ORF1ab/nsp31242D1242DgaCgaT11B.1.351.20.000303
ORF1ab/nsp31242D1242DgaCgaT11B.1.36.170.000494
ORF1ab/nsp31242D1242DgaCgaT11B.1.362.20.004717
ORF1ab/nsp31242D1242DgaCgaT11B.1.4210.007463
ORF1ab/nsp31242D1242DgaCgaT11B.1.466.20.000391
ORF1ab/nsp31242D1242DgaCgaT11B.1.5640.000426
ORF1ab/nsp31242D1242DgaCgaT11B.1.5720.025
ORF1ab/nsp31242D1242DgaCgaT11B.1.5760.000907
ORF1ab/nsp31242D1242DgaCgaT11C.180.002591
ORF1ab/nsp31242D1242DgaCgaT11G.10.041667
ORF1ab/nsp31242D1242DgaCgaT11N.40.004255
ORF1ab/nsp31242D1242DgaCgaT11P.1.170.000162
ORF1ab/nsp31242D1242DgaCgaT11P.50.013699
ORF1ab/nsp31242D1242DgaCgaT11Q.20.000613
ORF1ab/nsp31242D1242DgaCgaT11Q.80.000165