CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C39L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp339C39LC857LnonsyntGCtTA420.52834-2836
ORF1ab/nsp339C39LC857LnonsynTGcCTc410.252834-2836
ORF1ab/nsp339C39LC857LnonsynTGCCTG410.252834-2836

Details of the mutation C39L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp339C39LtGCtTA24All0
ORF1ab/nsp339C39LTGcCTc14All0
ORF1ab/nsp339C39LTGCCTG14All0
ORF1ab/nsp339C39LtGCtTA220.111111
ORF1ab/nsp339C39LTGCCTG11B.10.000009
ORF1ab/nsp339C39LTGcCTc11B.1.1.5190.00004