CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C39I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp339C39IC857InonsynTGcATc210.52834-2836
ORF1ab/nsp339C39IC857InonsynTGCATT210.52834-2836

Details of the mutation C39I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp339C39ITGcATc120.055556
ORF1ab/nsp339C39ITGCATT120.055556
ORF1ab/nsp339C39ITGcATc12All0
ORF1ab/nsp339C39ITGCATT12All0