CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C39G

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp339C39GC857GnonsynTgcGgc11100.9090912834-2836
ORF1ab/nsp339C39GC857GnonsynTgCGgT1110.09090912834-2836

Details of the mutation C39G within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp339C39GTgcGgc1011All0.000002
ORF1ab/nsp339C39GTgCGgT111All0
ORF1ab/nsp339C39GTgcGgc33B.1.1.70.000003
ORF1ab/nsp339C39GTgcGgc120.055556
ORF1ab/nsp339C39GTgCGgT120.055556
ORF1ab/nsp339C39GTgcGgc11B.1.10.000018
ORF1ab/nsp339C39GTgcGgc11B.1.1.250.000569
ORF1ab/nsp339C39GTgcGgc11B.1.1600.000031
ORF1ab/nsp339C39GTgcGgc11B.1.5880.00091
ORF1ab/nsp339C39GTgcGgc11B.570.015152
ORF1ab/nsp339C39GTgcGgc11D.20.000075