CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1634X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31634C1634XC2452XnonsyntgTtgA540.87619-7621
ORF1ab/nsp31634C1634XC2452XnonsyntGTtAA510.27619-7621

Details of the mutation C1634X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31634C1634XtgTtgA45All0.000001
ORF1ab/nsp31634C1634XtGTtAA15All0
ORF1ab/nsp31634C1634XtgTtgA110.055556
ORF1ab/nsp31634C1634XtgTtgA11AY.250.000006
ORF1ab/nsp31634C1634XtgTtgA11B.10.000009
ORF1ab/nsp31634C1634XtgTtgA11B.1.36.160.001425
ORF1ab/nsp31634C1634XtGTtAA11C.350.000774