CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1627S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31627C1627SC2445SnonsyntGctCc840.57598-7600
ORF1ab/nsp31627C1627SC2445SnonsyntGCtCA820.257598-7600
ORF1ab/nsp31627C1627SC2445SnonsynTgcAgc820.257598-7600

Details of the mutation C1627S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31627C1627StGctCc48All0.000001
ORF1ab/nsp31627C1627StGCtCA28All0
ORF1ab/nsp31627C1627STgcAgc28All0
ORF1ab/nsp31627C1627STgcAgc220.111111
ORF1ab/nsp31627C1627StGCtCA11B0.000128
ORF1ab/nsp31627C1627StGctCc11B.10.000009
ORF1ab/nsp31627C1627StGctCc11B.1.10.000018
ORF1ab/nsp31627C1627StGctCc11B.1.4290.000024
ORF1ab/nsp31627C1627StGCtCA11C.360.000911
ORF1ab/nsp31627C1627StGctCc11R.10.00009