CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1627C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31627C1627CC2445CsyntgCtgT117071170717598-7600

Details of the mutation C1627C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31627C1627CtgCtgT1170711707All0.002239
ORF1ab/nsp31627C1627CtgCtgT45534553B.1.1.70.004076
ORF1ab/nsp31627C1627CtgCtgT11231123AY.120.10.360514
ORF1ab/nsp31627C1627CtgCtgT670670B.1.617.20.002523
ORF1ab/nsp31627C1627CtgCtgT595595B.1.5880.541401
ORF1ab/nsp31627C1627CtgCtgT579579AY.980.045738
ORF1ab/nsp31627C1627CtgCtgT430430AY.40.000669
ORF1ab/nsp31627C1627CtgCtgT243243B.1.20.00214
ORF1ab/nsp31627C1627CtgCtgT180180AY.39.10.00713
ORF1ab/nsp31627C1627CtgCtgT175175AY.430.000775
ORF1ab/nsp31627C1627CtgCtgT168168D.30.994083
ORF1ab/nsp31627C1627CtgCtgT168168N.91
ORF1ab/nsp31627C1627CtgCtgT125125AY.30.001243
ORF1ab/nsp31627C1627CtgCtgT116116B.10.001063
ORF1ab/nsp31627C1627CtgCtgT108108AY.440.000657
ORF1ab/nsp31627C1627CtgCtgT103103AY.1030.00064
ORF1ab/nsp31627C1627CtgCtgT9393B.1.4270.004696
ORF1ab/nsp31627C1627CtgCtgT9191AY.50.001879
ORF1ab/nsp31627C1627CtgCtgT8989B.1.10.001615
ORF1ab/nsp31627C1627CtgCtgT8585B.1.2210.006038
ORF1ab/nsp31627C1627CtgCtgT8383AY.46.50.016468
ORF1ab/nsp31627C1627CtgCtgT8181AY.250.000487
ORF1ab/nsp31627C1627CtgCtgT8181B.1.1.2140.004492
ORF1ab/nsp31627C1627CtgCtgT7979AY.750.004426
ORF1ab/nsp31627C1627CtgCtgT7676B.1.1770.001001
ORF1ab/nsp31627C1627CtgCtgT7676P.10.001197
ORF1ab/nsp31627C1627CtgCtgT6363B.1.4290.001482
ORF1ab/nsp31627C1627CtgCtgT6060AY.1000.00276
ORF1ab/nsp31627C1627CtgCtgT6060B.1.5260.00141
ORF1ab/nsp31627C1627CtgCtgT5757B.1.177.120.008647
ORF1ab/nsp31627C1627CtgCtgT5353B.1.2400.011425
ORF1ab/nsp31627C1627CtgCtgT3939B.1.1600.001216
ORF1ab/nsp31627C1627CtgCtgT3838B.1.1.5190.001509
ORF1ab/nsp31627C1627CtgCtgT3838B.1.5950.009916
ORF1ab/nsp31627C1627CtgCtgT3737B.1.1.3280.627119
ORF1ab/nsp31627C1627CtgCtgT3131B.1.177.810.005869
ORF1ab/nsp31627C1627CtgCtgT2929AY.230.002023
ORF1ab/nsp31627C1627CtgCtgT2727AY.1200.001004
ORF1ab/nsp31627C1627CtgCtgT2626B.1.588.11
ORF1ab/nsp31627C1627CtgCtgT2525B.1.177.540.015161
ORF1ab/nsp31627C1627CtgCtgT2323B.1.1040.084871
ORF1ab/nsp31627C1627CtgCtgT2222B.1.3510.000654
ORF1ab/nsp31627C1627CtgCtgT2121AY.390.000519
ORF1ab/nsp31627C1627CtgCtgT2020AY.460.002082
ORF1ab/nsp31627C1627CtgCtgT2020AY.46.60.001444
ORF1ab/nsp31627C1627CtgCtgT1919AY.1020.000504
ORF1ab/nsp31627C1627CtgCtgT1919AY.200.000738
ORF1ab/nsp31627C1627CtgCtgT1919B.1.1.10.006207
ORF1ab/nsp31627C1627CtgCtgT1818B.1.5250.002037
ORF1ab/nsp31627C1627CtgCtgT1717AY.470.000529
ORF1ab/nsp31627C1627CtgCtgT1717B.1.360.00248
ORF1ab/nsp31627C1627CtgCtgT1616AY.260.000453
ORF1ab/nsp31627C1627CtgCtgT1515AY.4.20.000325
ORF1ab/nsp31627C1627CtgCtgT1515Q.80.002474
ORF1ab/nsp31627C1627CtgCtgT1313AY.98.10.00063
ORF1ab/nsp31627C1627CtgCtgT1313B.1.1.330.005471
ORF1ab/nsp31627C1627CtgCtgT1212A.210.033241
ORF1ab/nsp31627C1627CtgCtgT1212AY.330.000801
ORF1ab/nsp31627C1627CtgCtgT1212B.1.1.3060.005261
ORF1ab/nsp31627C1627CtgCtgT1212B.1.351.50.007194
ORF1ab/nsp31627C1627CtgCtgT1212B.1.5750.003641
ORF1ab/nsp31627C1627CtgCtgT1212C.370.001393
ORF1ab/nsp31627C1627CtgCtgT1111AY.420.000443
ORF1ab/nsp31627C1627CtgCtgT1111B.1.1080.063953
ORF1ab/nsp31627C1627CtgCtgT1111P.1.130.009883
ORF1ab/nsp31627C1627CtgCtgT1010AY.360.001482
ORF1ab/nsp31627C1627CtgCtgT1010AY.9.20.000367
ORF1ab/nsp31627C1627CtgCtgT1010B.1.1.1410.020121
ORF1ab/nsp31627C1627CtgCtgT1010B.1.1.280.003112
ORF1ab/nsp31627C1627CtgCtgT1010P.20.001866
ORF1ab/nsp31627C1627CtgCtgT99AY.1190.000318
ORF1ab/nsp31627C1627CtgCtgT99AY.290.000142
ORF1ab/nsp31627C1627CtgCtgT99AY.46.20.005718
ORF1ab/nsp31627C1627CtgCtgT99AY.7.10.001014
ORF1ab/nsp31627C1627CtgCtgT99AY.9.10.000754
ORF1ab/nsp31627C1627CtgCtgT99B.1.1.470.048128
ORF1ab/nsp31627C1627CtgCtgT99B.1.5670.03
ORF1ab/nsp31627C1627CtgCtgT99B.1.6210.000797
ORF1ab/nsp31627C1627CtgCtgT99P.1.10.002859
ORF1ab/nsp31627C1627CtgCtgT88AY.540.000763
ORF1ab/nsp31627C1627CtgCtgT88B.1.1.1870.070796
ORF1ab/nsp31627C1627CtgCtgT88B.1.1.3930.888889
ORF1ab/nsp31627C1627CtgCtgT88B.1.4000.003432
ORF1ab/nsp31627C1627CtgCtgT88B.1.4990.008403
ORF1ab/nsp31627C1627CtgCtgT88B.1.6370.000585
ORF1ab/nsp31627C1627CtgCtgT77AY.1060.002344
ORF1ab/nsp31627C1627CtgCtgT77AY.90.000473
ORF1ab/nsp31627C1627CtgCtgT77B0.000895
ORF1ab/nsp31627C1627CtgCtgT77B.1.1110.008226
ORF1ab/nsp31627C1627CtgCtgT77B.1.177.820.003341
ORF1ab/nsp31627C1627CtgCtgT77B.1.36.290.003621
ORF1ab/nsp31627C1627CtgCtgT77D.20.000525
ORF1ab/nsp31627C1627CtgCtgT66AY.140.000528
ORF1ab/nsp31627C1627CtgCtgT66B.1.1.3890.036364
ORF1ab/nsp31627C1627CtgCtgT66B.1.2340.000792
ORF1ab/nsp31627C1627CtgCtgT66B.1.3110.001647
ORF1ab/nsp31627C1627CtgCtgT55AY.3.10.000426
ORF1ab/nsp31627C1627CtgCtgT55AY.840.002187
ORF1ab/nsp31627C1627CtgCtgT55AY.99.20.000461
ORF1ab/nsp31627C1627CtgCtgT55B.1.1.250.002843
ORF1ab/nsp31627C1627CtgCtgT55B.1.2580.000333
ORF1ab/nsp31627C1627CtgCtgT55B.1.5960.000436
ORF1ab/nsp31627C1627CtgCtgT55P.1.140.000239
ORF1ab/nsp31627C1627CtgCtgT55P.1.150.001162
ORF1ab/nsp31627C1627CtgCtgT55Q.10.000632
ORF1ab/nsp31627C1627CtgCtgT44AY.1170.000338
ORF1ab/nsp31627C1627CtgCtgT44AY.1180.000251
ORF1ab/nsp31627C1627CtgCtgT44AY.1210.000541
ORF1ab/nsp31627C1627CtgCtgT44AY.4.50.00043
ORF1ab/nsp31627C1627CtgCtgT44AY.5.40.001107
ORF1ab/nsp31627C1627CtgCtgT44AY.610.000419
ORF1ab/nsp31627C1627CtgCtgT44AY.620.001743
ORF1ab/nsp31627C1627CtgCtgT44B.1.1.3170.001647
ORF1ab/nsp31627C1627CtgCtgT44B.1.177.480.0125
ORF1ab/nsp31627C1627CtgCtgT44B.1.36.380.006568
ORF1ab/nsp31627C1627CtgCtgT44B.1.3960.002823
ORF1ab/nsp31627C1627CtgCtgT44B.1.6090.001918
ORF1ab/nsp31627C1627CtgCtgT33AY.5.30.001012
ORF1ab/nsp31627C1627CtgCtgT33AY.630.001161
ORF1ab/nsp31627C1627CtgCtgT33AY.930.000819
ORF1ab/nsp31627C1627CtgCtgT33B.1.1.2220.000612
ORF1ab/nsp31627C1627CtgCtgT33B.1.1.2770.002276
ORF1ab/nsp31627C1627CtgCtgT33B.1.177.330.004934
ORF1ab/nsp31627C1627CtgCtgT33B.1.177.460.002755
ORF1ab/nsp31627C1627CtgCtgT33B.1.177.70.000495
ORF1ab/nsp31627C1627CtgCtgT33B.1.2430.000209
ORF1ab/nsp31627C1627CtgCtgT33B.1.351.20.000908
ORF1ab/nsp31627C1627CtgCtgT33B.1.3620.004622
ORF1ab/nsp31627C1627CtgCtgT33B.1.438.10.000322
ORF1ab/nsp31627C1627CtgCtgT33B.1.466.20.001174
ORF1ab/nsp31627C1627CtgCtgT33B.1.6230.001609
ORF1ab/nsp31627C1627CtgCtgT33B.6.60.002667
ORF1ab/nsp31627C1627CtgCtgT22A.23.10.001408
ORF1ab/nsp31627C1627CtgCtgT22AY.1080.002205
ORF1ab/nsp31627C1627CtgCtgT22AY.160.000759
ORF1ab/nsp31627C1627CtgCtgT22AY.240.000862
ORF1ab/nsp31627C1627CtgCtgT22AY.29.10.000441
ORF1ab/nsp31627C1627CtgCtgT22AY.4.40.000818
ORF1ab/nsp31627C1627CtgCtgT22AY.450.000243
ORF1ab/nsp31627C1627CtgCtgT22AY.46.40.000329
ORF1ab/nsp31627C1627CtgCtgT22AY.480.00093
ORF1ab/nsp31627C1627CtgCtgT22AY.590.001059
ORF1ab/nsp31627C1627CtgCtgT22AY.650.001066
ORF1ab/nsp31627C1627CtgCtgT22AY.850.000854
ORF1ab/nsp31627C1627CtgCtgT22B.1.1.1920.004619
ORF1ab/nsp31627C1627CtgCtgT22B.1.1.3120.003824
ORF1ab/nsp31627C1627CtgCtgT22B.1.1.3750.02381
ORF1ab/nsp31627C1627CtgCtgT22B.1.1.50.016667
ORF1ab/nsp31627C1627CtgCtgT22B.1.160.190.071429
ORF1ab/nsp31627C1627CtgCtgT22B.1.177.320.002699
ORF1ab/nsp31627C1627CtgCtgT22B.1.177.520.003515
ORF1ab/nsp31627C1627CtgCtgT22B.1.214.20.001199
ORF1ab/nsp31627C1627CtgCtgT22B.1.2650.002541
ORF1ab/nsp31627C1627CtgCtgT22B.1.3460.002621
ORF1ab/nsp31627C1627CtgCtgT22B.1.36.160.002849
ORF1ab/nsp31627C1627CtgCtgT22B.1.36.270.001527
ORF1ab/nsp31627C1627CtgCtgT22B.1.3690.00057
ORF1ab/nsp31627C1627CtgCtgT22B.1.5640.000852
ORF1ab/nsp31627C1627CtgCtgT22B.1.5820.000981
ORF1ab/nsp31627C1627CtgCtgT22B.1.617.10.000258
ORF1ab/nsp31627C1627CtgCtgT22B.1.621.10.001012
ORF1ab/nsp31627C1627CtgCtgT22B.1.930.001867
ORF1ab/nsp31627C1627CtgCtgT22B.4.10.037736
ORF1ab/nsp31627C1627CtgCtgT22C.160.002121
ORF1ab/nsp31627C1627CtgCtgT22N.60.014184
ORF1ab/nsp31627C1627CtgCtgT22P.1.160.000748
ORF1ab/nsp31627C1627CtgCtgT22P.1.20.002312
ORF1ab/nsp31627C1627CtgCtgT110.055556
ORF1ab/nsp31627C1627CtgCtgT11A.2.50.000499
ORF1ab/nsp31627C1627CtgCtgT11A.50.001923
ORF1ab/nsp31627C1627CtgCtgT11AP.10.001502
ORF1ab/nsp31627C1627CtgCtgT11AU.30.00211
ORF1ab/nsp31627C1627CtgCtgT11AY.1140.000231
ORF1ab/nsp31627C1627CtgCtgT11AY.116.10.000311
ORF1ab/nsp31627C1627CtgCtgT11AY.120.000316
ORF1ab/nsp31627C1627CtgCtgT11AY.120.2.10.000498
ORF1ab/nsp31627C1627CtgCtgT11AY.16.10.00047
ORF1ab/nsp31627C1627CtgCtgT11AY.270.000065
ORF1ab/nsp31627C1627CtgCtgT11AY.300.000396
ORF1ab/nsp31627C1627CtgCtgT11AY.340.000097
ORF1ab/nsp31627C1627CtgCtgT11AY.34.10.00051
ORF1ab/nsp31627C1627CtgCtgT11AY.39.20.001541
ORF1ab/nsp31627C1627CtgCtgT11AY.4.10.000737
ORF1ab/nsp31627C1627CtgCtgT11AY.4.2.10.000149
ORF1ab/nsp31627C1627CtgCtgT11AY.4.30.000842
ORF1ab/nsp31627C1627CtgCtgT11AY.400.000964
ORF1ab/nsp31627C1627CtgCtgT11AY.410.000294
ORF1ab/nsp31627C1627CtgCtgT11AY.510.000909
ORF1ab/nsp31627C1627CtgCtgT11AY.530.000288
ORF1ab/nsp31627C1627CtgCtgT11AY.570.000656
ORF1ab/nsp31627C1627CtgCtgT11AY.60.000041
ORF1ab/nsp31627C1627CtgCtgT11AY.680.000274
ORF1ab/nsp31627C1627CtgCtgT11AY.70.000196
ORF1ab/nsp31627C1627CtgCtgT11AY.75.10.00018
ORF1ab/nsp31627C1627CtgCtgT11AY.780.001541
ORF1ab/nsp31627C1627CtgCtgT11AY.920.000287
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.1740.003378
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.2160.00089
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.2210.010101
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.2430.004082
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.2630.001558
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.3180.000302
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.3370.003597
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.3540.004386
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.3690.000446
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.3720.000689
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.390.00051
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.4010.066667
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.4110.014706
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.4160.000905
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.4300.041667
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.5070.008696
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.5250.005464
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.5260.003546
ORF1ab/nsp31627C1627CtgCtgT11B.1.1.610.008772
ORF1ab/nsp31627C1627CtgCtgT11B.1.1280.000635
ORF1ab/nsp31627C1627CtgCtgT11B.1.160.260.002421
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.200.001517
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.210.000076
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.230.003236
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.40.000211
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.410.0025
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.440.000519
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.530.002392
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.60.000977
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.600.000218
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.720.00339
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.730.000566
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.750.001041
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.790.002342
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.860.000183
ORF1ab/nsp31627C1627CtgCtgT11B.1.177.90.001332
ORF1ab/nsp31627C1627CtgCtgT11B.1.1900.01
ORF1ab/nsp31627C1627CtgCtgT11B.1.2140.003663
ORF1ab/nsp31627C1627CtgCtgT11B.1.2390.001221
ORF1ab/nsp31627C1627CtgCtgT11B.1.2470.014925
ORF1ab/nsp31627C1627CtgCtgT11B.1.258.110.000396
ORF1ab/nsp31627C1627CtgCtgT11B.1.258.170.000104
ORF1ab/nsp31627C1627CtgCtgT11B.1.2600.003344
ORF1ab/nsp31627C1627CtgCtgT11B.1.2790.000514
ORF1ab/nsp31627C1627CtgCtgT11B.1.3050.002151
ORF1ab/nsp31627C1627CtgCtgT11B.1.3250.006897
ORF1ab/nsp31627C1627CtgCtgT11B.1.3290.000608
ORF1ab/nsp31627C1627CtgCtgT11B.1.3560.001727
ORF1ab/nsp31627C1627CtgCtgT11B.1.36.180.00042
ORF1ab/nsp31627C1627CtgCtgT11B.1.36.360.000602
ORF1ab/nsp31627C1627CtgCtgT11B.1.3660.004878
ORF1ab/nsp31627C1627CtgCtgT11B.1.3670.000792
ORF1ab/nsp31627C1627CtgCtgT11B.1.3710.001122
ORF1ab/nsp31627C1627CtgCtgT11B.1.3800.006623
ORF1ab/nsp31627C1627CtgCtgT11B.1.4360.001029
ORF1ab/nsp31627C1627CtgCtgT11B.1.4380.006536
ORF1ab/nsp31627C1627CtgCtgT11B.1.4590.004082
ORF1ab/nsp31627C1627CtgCtgT11B.1.4740.001901
ORF1ab/nsp31627C1627CtgCtgT11B.1.5030.002488
ORF1ab/nsp31627C1627CtgCtgT11B.1.5510.00129
ORF1ab/nsp31627C1627CtgCtgT11B.1.564.10.001577
ORF1ab/nsp31627C1627CtgCtgT11B.1.5770.000687
ORF1ab/nsp31627C1627CtgCtgT11B.1.5800.004065
ORF1ab/nsp31627C1627CtgCtgT11B.1.5940.03125
ORF1ab/nsp31627C1627CtgCtgT11B.1.5990.00365
ORF1ab/nsp31627C1627CtgCtgT11B.550.00295
ORF1ab/nsp31627C1627CtgCtgT11B.60.00091
ORF1ab/nsp31627C1627CtgCtgT11C.110.010638
ORF1ab/nsp31627C1627CtgCtgT11C.360.000911
ORF1ab/nsp31627C1627CtgCtgT11C.36.30.000567
ORF1ab/nsp31627C1627CtgCtgT11N.10.016949
ORF1ab/nsp31627C1627CtgCtgT11P.1.170.000162
ORF1ab/nsp31627C1627CtgCtgT11P.1.70.000319