CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1347R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31347C1347RC2165RnonsynTgtCgt25240.966758-6760
ORF1ab/nsp31347C1347RC2165RnonsynTgTAgA2510.046758-6760

Details of the mutation C1347R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31347C1347RTgtCgt2425All0.000005
ORF1ab/nsp31347C1347RTgTAgA125All0
ORF1ab/nsp31347C1347RTgtCgt1212B.1.1.70.000011
ORF1ab/nsp31347C1347RTgtCgt12B.1.10.000018
ORF1ab/nsp31347C1347RTgTAgA12B.1.10.000018
ORF1ab/nsp31347C1347RTgtCgt11AY.140.000088
ORF1ab/nsp31347C1347RTgtCgt11AY.200.000039
ORF1ab/nsp31347C1347RTgtCgt11AY.290.000016
ORF1ab/nsp31347C1347RTgtCgt11AY.40.000002
ORF1ab/nsp31347C1347RTgtCgt11AY.430.000004
ORF1ab/nsp31347C1347RTgtCgt11AY.610.000105
ORF1ab/nsp31347C1347RTgtCgt11AY.680.000274
ORF1ab/nsp31347C1347RTgtCgt11AY.740.000116
ORF1ab/nsp31347C1347RTgtCgt11B.10.000009
ORF1ab/nsp31347C1347RTgtCgt11B.1.160.90.007194
ORF1ab/nsp31347C1347RTgtCgt11B.1.4230.010204