CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1246X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31246C1246XC2064XnonsyntgTtgA530.66455-6457
ORF1ab/nsp31246C1246XC2064XnonsyntGTtAA520.46455-6457

Details of the mutation C1246X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31246C1246XtgTtgA35All0.000001
ORF1ab/nsp31246C1246XtGTtAA25All0
ORF1ab/nsp31246C1246XtgTtgA230.111111
ORF1ab/nsp31246C1246XtGTtAA130.055556
ORF1ab/nsp31246C1246XtgTtgA11B.1.10.000018
ORF1ab/nsp31246C1246XtGTtAA11B.1.1.70.000001