CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1223C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31223C1223CC2041CsyntgCtgT2985298516386-6388

Details of the mutation C1223C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31223C1223CtgCtgT29852985All0.000571
ORF1ab/nsp31223C1223CtgCtgT14261426AY.640.84881
ORF1ab/nsp31223C1223CtgCtgT331331B.1.1.70.000296
ORF1ab/nsp31223C1223CtgCtgT176176B.1.177.210.013459
ORF1ab/nsp31223C1223CtgCtgT120120B.1.617.20.000452
ORF1ab/nsp31223C1223CtgCtgT9696AY.40.000149
ORF1ab/nsp31223C1223CtgCtgT6969AY.30.000686
ORF1ab/nsp31223C1223CtgCtgT6565AY.430.000288
ORF1ab/nsp31223C1223CtgCtgT5757B.1.1.3020.118257
ORF1ab/nsp31223C1223CtgCtgT5050B.1.20.00044
ORF1ab/nsp31223C1223CtgCtgT4848B.1.177.420.042934
ORF1ab/nsp31223C1223CtgCtgT3434B.10.000311
ORF1ab/nsp31223C1223CtgCtgT2525AY.250.00015
ORF1ab/nsp31223C1223CtgCtgT2424AY.1030.000149
ORF1ab/nsp31223C1223CtgCtgT2222AY.440.000134
ORF1ab/nsp31223C1223CtgCtgT2121B.1.1.5190.000834
ORF1ab/nsp31223C1223CtgCtgT1919B.1.10.000345
ORF1ab/nsp31223C1223CtgCtgT1818AY.650.009595
ORF1ab/nsp31223C1223CtgCtgT1818P.10.000284
ORF1ab/nsp31223C1223CtgCtgT1717AY.4.20.000369
ORF1ab/nsp31223C1223CtgCtgT1313AY.1170.001099
ORF1ab/nsp31223C1223CtgCtgT1212AY.240.005172
ORF1ab/nsp31223C1223CtgCtgT1212AY.260.00034
ORF1ab/nsp31223C1223CtgCtgT1111B.1.2430.000765
ORF1ab/nsp31223C1223CtgCtgT1010B.1.1600.000312
ORF1ab/nsp31223C1223CtgCtgT1010B.1.1770.000132
ORF1ab/nsp31223C1223CtgCtgT99AY.130.001449
ORF1ab/nsp31223C1223CtgCtgT88AY.750.000448
ORF1ab/nsp31223C1223CtgCtgT88B.1.258.230.190476
ORF1ab/nsp31223C1223CtgCtgT88B.1.5950.002088
ORF1ab/nsp31223C1223CtgCtgT77AY.1000.000322
ORF1ab/nsp31223C1223CtgCtgT77AY.400.00675
ORF1ab/nsp31223C1223CtgCtgT77B.1.3510.000208
ORF1ab/nsp31223C1223CtgCtgT77B.1.5260.000165
ORF1ab/nsp31223C1223CtgCtgT77B.1.6370.000512
ORF1ab/nsp31223C1223CtgCtgT77Q.80.001154
ORF1ab/nsp31223C1223CtgCtgT66AY.1020.000159
ORF1ab/nsp31223C1223CtgCtgT66AY.1080.006615
ORF1ab/nsp31223C1223CtgCtgT66AY.50.000124
ORF1ab/nsp31223C1223CtgCtgT55AY.1190.000177
ORF1ab/nsp31223C1223CtgCtgT55AY.390.000124
ORF1ab/nsp31223C1223CtgCtgT55AY.940.002213
ORF1ab/nsp31223C1223CtgCtgT55B.1.1.280.001556
ORF1ab/nsp31223C1223CtgCtgT55B.1.1.330.002104
ORF1ab/nsp31223C1223CtgCtgT55B.1.1.3690.002231
ORF1ab/nsp31223C1223CtgCtgT55B.1.4270.000252
ORF1ab/nsp31223C1223CtgCtgT44AY.39.10.000158
ORF1ab/nsp31223C1223CtgCtgT44AY.670.001857
ORF1ab/nsp31223C1223CtgCtgT44AY.90.00027
ORF1ab/nsp31223C1223CtgCtgT44AY.9.20.000147
ORF1ab/nsp31223C1223CtgCtgT44B.1.1.4290.018433
ORF1ab/nsp31223C1223CtgCtgT44B.1.1.750.042553
ORF1ab/nsp31223C1223CtgCtgT44B.1.177.150.002524
ORF1ab/nsp31223C1223CtgCtgT44B.1.360.000584
ORF1ab/nsp31223C1223CtgCtgT44R.10.00036
ORF1ab/nsp31223C1223CtgCtgT33AY.100.00159
ORF1ab/nsp31223C1223CtgCtgT33AY.1100.000338
ORF1ab/nsp31223C1223CtgCtgT33AY.1200.000112
ORF1ab/nsp31223C1223CtgCtgT33AY.140.000264
ORF1ab/nsp31223C1223CtgCtgT33AY.200.000117
ORF1ab/nsp31223C1223CtgCtgT33AY.290.000047
ORF1ab/nsp31223C1223CtgCtgT33B.1.2210.000213
ORF1ab/nsp31223C1223CtgCtgT33B.1.4390.017751
ORF1ab/nsp31223C1223CtgCtgT33B.1.5250.000339
ORF1ab/nsp31223C1223CtgCtgT33B.1.5610.001191
ORF1ab/nsp31223C1223CtgCtgT22AY.1210.000271
ORF1ab/nsp31223C1223CtgCtgT22AY.330.000134
ORF1ab/nsp31223C1223CtgCtgT22AY.380.000999
ORF1ab/nsp31223C1223CtgCtgT22AY.420.00008
ORF1ab/nsp31223C1223CtgCtgT22AY.46.20.001271
ORF1ab/nsp31223C1223CtgCtgT22AY.5.30.000675
ORF1ab/nsp31223C1223CtgCtgT22AY.600.001876
ORF1ab/nsp31223C1223CtgCtgT22AY.610.00021
ORF1ab/nsp31223C1223CtgCtgT22B0.000256
ORF1ab/nsp31223C1223CtgCtgT22B.1.1.630.000772
ORF1ab/nsp31223C1223CtgCtgT22B.1.177.120.000303
ORF1ab/nsp31223C1223CtgCtgT22B.1.177.620.002384
ORF1ab/nsp31223C1223CtgCtgT22B.1.4290.000047
ORF1ab/nsp31223C1223CtgCtgT22B.1.5960.000174
ORF1ab/nsp31223C1223CtgCtgT22P.1.120.000968
ORF1ab/nsp31223C1223CtgCtgT22P.1.140.000096
ORF1ab/nsp31223C1223CtgCtgT22P.20.000373
ORF1ab/nsp31223C1223CtgCtgT11A.10.000282
ORF1ab/nsp31223C1223CtgCtgT11A.2.40.003367
ORF1ab/nsp31223C1223CtgCtgT11A.23.10.000704
ORF1ab/nsp31223C1223CtgCtgT11AY.1050.000643
ORF1ab/nsp31223C1223CtgCtgT11AY.1070.000466
ORF1ab/nsp31223C1223CtgCtgT11AY.1160.000287
ORF1ab/nsp31223C1223CtgCtgT11AY.120.10.000321
ORF1ab/nsp31223C1223CtgCtgT11AY.16.10.00047
ORF1ab/nsp31223C1223CtgCtgT11AY.23.10.000417
ORF1ab/nsp31223C1223CtgCtgT11AY.300.000396
ORF1ab/nsp31223C1223CtgCtgT11AY.370.000316
ORF1ab/nsp31223C1223CtgCtgT11AY.4.2.10.000149
ORF1ab/nsp31223C1223CtgCtgT11AY.4.50.000107
ORF1ab/nsp31223C1223CtgCtgT11AY.450.000122
ORF1ab/nsp31223C1223CtgCtgT11AY.46.60.000072
ORF1ab/nsp31223C1223CtgCtgT11AY.470.000031
ORF1ab/nsp31223C1223CtgCtgT11AY.540.000095
ORF1ab/nsp31223C1223CtgCtgT11AY.570.000656
ORF1ab/nsp31223C1223CtgCtgT11AY.590.00053
ORF1ab/nsp31223C1223CtgCtgT11AY.60.000041
ORF1ab/nsp31223C1223CtgCtgT11AY.620.000436
ORF1ab/nsp31223C1223CtgCtgT11AY.690.000187
ORF1ab/nsp31223C1223CtgCtgT11AY.70.000196
ORF1ab/nsp31223C1223CtgCtgT11AY.730.000665
ORF1ab/nsp31223C1223CtgCtgT11AY.740.000116
ORF1ab/nsp31223C1223CtgCtgT11AY.75.10.00018
ORF1ab/nsp31223C1223CtgCtgT11AY.98.10.000048
ORF1ab/nsp31223C1223CtgCtgT11AY.99.20.000092
ORF1ab/nsp31223C1223CtgCtgT11B.1.1.1920.002309
ORF1ab/nsp31223C1223CtgCtgT11B.1.1.3160.000925
ORF1ab/nsp31223C1223CtgCtgT11B.1.1.3170.000412
ORF1ab/nsp31223C1223CtgCtgT11B.1.1.5230.001563
ORF1ab/nsp31223C1223CtgCtgT11B.1.160.170.001701
ORF1ab/nsp31223C1223CtgCtgT11B.1.177.520.001757
ORF1ab/nsp31223C1223CtgCtgT11B.1.177.600.000218
ORF1ab/nsp31223C1223CtgCtgT11B.1.177.730.000566
ORF1ab/nsp31223C1223CtgCtgT11B.1.220.001318
ORF1ab/nsp31223C1223CtgCtgT11B.1.2650.001271
ORF1ab/nsp31223C1223CtgCtgT11B.1.351.20.000303
ORF1ab/nsp31223C1223CtgCtgT11B.1.351.50.0006
ORF1ab/nsp31223C1223CtgCtgT11B.1.3560.001727
ORF1ab/nsp31223C1223CtgCtgT11B.1.36.180.00042
ORF1ab/nsp31223C1223CtgCtgT11B.1.3690.000285
ORF1ab/nsp31223C1223CtgCtgT11B.1.3810.007812
ORF1ab/nsp31223C1223CtgCtgT11B.1.3960.000706
ORF1ab/nsp31223C1223CtgCtgT11B.1.438.10.000107
ORF1ab/nsp31223C1223CtgCtgT11B.1.617.10.000129
ORF1ab/nsp31223C1223CtgCtgT11B.1.6280.000352
ORF1ab/nsp31223C1223CtgCtgT11B.6.50.076923
ORF1ab/nsp31223C1223CtgCtgT11C.370.000116
ORF1ab/nsp31223C1223CtgCtgT11P.1.10.000318
ORF1ab/nsp31223C1223CtgCtgT11P.1.100.000269
ORF1ab/nsp31223C1223CtgCtgT11V.20.032258