CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = C1071S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31071C1071SC1889SnonsynTgtAgt23150.6521745930-5932
ORF1ab/nsp31071C1071SC1889SnonsyntGttCt2380.3478265930-5932

Details of the mutation C1071S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31071C1071STgtAgt1523All0.000003
ORF1ab/nsp31071C1071StGttCt823All0.000002
ORF1ab/nsp31071C1071STgtAgt77B.1.1.70.000006
ORF1ab/nsp31071C1071STgtAgt33B.1.617.20.000011
ORF1ab/nsp31071C1071STgtAgt220.111111
ORF1ab/nsp31071C1071StGttCt12AY.440.000006
ORF1ab/nsp31071C1071STgtAgt12AY.440.000006
ORF1ab/nsp31071C1071STgtAgt11AY.1210.000135
ORF1ab/nsp31071C1071StGttCt11AY.430.000004
ORF1ab/nsp31071C1071StGttCt11B0.000128
ORF1ab/nsp31071C1071StGttCt11B.1.10.000018
ORF1ab/nsp31071C1071StGttCt11B.1.1.2790.001121
ORF1ab/nsp31071C1071STgtAgt11B.1.1.5190.00004
ORF1ab/nsp31071C1071StGttCt11B.1.2580.000067
ORF1ab/nsp31071C1071StGttCt11C.350.000774
ORF1ab/nsp31071C1071StGttCt11D.20.000075