CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A975A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3975A975AA1793AsyngcTgcC196219560.9969425642-5644
ORF1ab/nsp3975A975AA1793AsyngcTgcA196240.002038745642-5644
ORF1ab/nsp3975A975AA1793AsyngcTgcG196220.001019375642-5644

Details of the mutation A975A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3975A975AgcTgcC19561962All0.000374
ORF1ab/nsp3975A975AgcTgcA41962All0.000001
ORF1ab/nsp3975A975AgcTgcG21962All0
ORF1ab/nsp3975A975AgcTgcC16831683AY.670.781337
ORF1ab/nsp3975A975AgcTgcC8888B.1.617.20.000331
ORF1ab/nsp3975A975AgcTgcC1519B.1.1.70.000013
ORF1ab/nsp3975A975AgcTgcA319B.1.1.70.000003
ORF1ab/nsp3975A975AgcTgcG119B.1.1.70.000001
ORF1ab/nsp3975A975AgcTgcC1616AY.290.000252
ORF1ab/nsp3975A975AgcTgcC1516P.10.000236
ORF1ab/nsp3975A975AgcTgcA116P.10.000016
ORF1ab/nsp3975A975AgcTgcC1515B.1.4290.000353
ORF1ab/nsp3975A975AgcTgcC1212AY.620.005229
ORF1ab/nsp3975A975AgcTgcC1111AY.40.000017
ORF1ab/nsp3975A975AgcTgcC77AY.690.001307
ORF1ab/nsp3975A975AgcTgcC55B.1.1.1230.089286
ORF1ab/nsp3975A975AgcTgcC44AY.1030.000025
ORF1ab/nsp3975A975AgcTgcC44AY.250.000024
ORF1ab/nsp3975A975AgcTgcC44AY.440.000024
ORF1ab/nsp3975A975AgcTgcC44AY.470.000124
ORF1ab/nsp3975A975AgcTgcC44B.1.5250.000453
ORF1ab/nsp3975A975AgcTgcC33AY.1000.000138
ORF1ab/nsp3975A975AgcTgcC33AY.1020.00008
ORF1ab/nsp3975A975AgcTgcC33AY.1200.000112
ORF1ab/nsp3975A975AgcTgcC33AY.610.000314
ORF1ab/nsp3975A975AgcTgcC33AY.75.10.000541
ORF1ab/nsp3975A975AgcTgcC33B.1.1.630.001157
ORF1ab/nsp3975A975AgcTgcC22AY.1190.000071
ORF1ab/nsp3975A975AgcTgcC22AY.240.000862
ORF1ab/nsp3975A975AgcTgcC22AY.430.000009
ORF1ab/nsp3975A975AgcTgcC22AY.700.000417
ORF1ab/nsp3975A975AgcTgcC22AY.750.000112
ORF1ab/nsp3975A975AgcTgcC22B.10.000018
ORF1ab/nsp3975A975AgcTgcC22B.1.177.350.001382
ORF1ab/nsp3975A975AgcTgcC22B.1.466.20.000782
ORF1ab/nsp3975A975AgcTgcC22B.1.5760.001813
ORF1ab/nsp3975A975AgcTgcC22B.1.5960.000174
ORF1ab/nsp3975A975AgcTgcC22B.1.617.30.00597
ORF1ab/nsp3975A975AgcTgcC11AY.100.00053
ORF1ab/nsp3975A975AgcTgcC11AY.1100.000113
ORF1ab/nsp3975A975AgcTgcC11AY.230.00007
ORF1ab/nsp3975A975AgcTgcC11AY.30.00001
ORF1ab/nsp3975A975AgcTgcC11AY.320.000532
ORF1ab/nsp3975A975AgcTgcC11AY.390.000025
ORF1ab/nsp3975A975AgcTgcC11AY.4.40.000409
ORF1ab/nsp3975A975AgcTgcC11AY.46.10.001027
ORF1ab/nsp3975A975AgcTgcG11AY.840.000437
ORF1ab/nsp3975A975AgcTgcC11AY.920.000287
ORF1ab/nsp3975A975AgcTgcC11AY.930.000273
ORF1ab/nsp3975A975AgcTgcC11B.1.1.280.000311
ORF1ab/nsp3975A975AgcTgcC11B.1.1.2940.001266
ORF1ab/nsp3975A975AgcTgcC11B.1.1.4210.030303
ORF1ab/nsp3975A975AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp3975A975AgcTgcC11B.1.1600.000031
ORF1ab/nsp3975A975AgcTgcC11B.1.177.440.000519
ORF1ab/nsp3975A975AgcTgcC11B.1.177.630.002703
ORF1ab/nsp3975A975AgcTgcC11B.1.177.860.000183
ORF1ab/nsp3975A975AgcTgcC11B.1.2390.001221
ORF1ab/nsp3975A975AgcTgcC11B.1.2400.000216
ORF1ab/nsp3975A975AgcTgcC11B.1.360.000146
ORF1ab/nsp3975A975AgcTgcC11B.1.36.360.000602
ORF1ab/nsp3975A975AgcTgcC11B.1.4040.001302
ORF1ab/nsp3975A975AgcTgcC11B.1.5090.000866
ORF1ab/nsp3975A975AgcTgcC11B.1.5260.000024
ORF1ab/nsp3975A975AgcTgcC11B.1.6280.000352
ORF1ab/nsp3975A975AgcTgcC11C.350.000774
ORF1ab/nsp3975A975AgcTgcC11C.370.000116
ORF1ab/nsp3975A975AgcTgcC11P.1.140.000048