CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A890D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3890A890DA1708DnonsyngCtgAt114280911426510.9998625387-5389
ORF1ab/nsp3890A890DA1708DnonsyngCTgAC11428091580.0001382565387-5389

Details of the mutation A890D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3890A890DgCtgAt11426511142809All0.218546
ORF1ab/nsp3890A890DgCTgAC1581142809All0.00003
ORF1ab/nsp3890A890DgCtgAt11109001111057B.1.1.70.994503
ORF1ab/nsp3890A890DgCTgAC1571111057B.1.1.70.000141
ORF1ab/nsp3890A890DgCtgAt79047904Q.10.998484
ORF1ab/nsp3890A890DgCtgAt68826882Q.30.998115
ORF1ab/nsp3890A890DgCtgAt54505450Q.80.898747
ORF1ab/nsp3890A890DgCtgAt24532454B.1.10.0445
ORF1ab/nsp3890A890DgCTgAC12454B.1.10.000018
ORF1ab/nsp3890A890DgCtgAt21872187Q.40.994543
ORF1ab/nsp3890A890DgCtgAt16231623Q.20.995706
ORF1ab/nsp3890A890DgCtgAt14821482B.10.013574
ORF1ab/nsp3890A890DgCtgAt894894Q.70.993333
ORF1ab/nsp3890A890DgCtgAt722722AY.40.001124
ORF1ab/nsp3890A890DgCtgAt174174B.1.3750.142623
ORF1ab/nsp3890A890DgCtgAt153153B.1.177.730.086636
ORF1ab/nsp3890A890DgCtgAt151151Q.61
ORF1ab/nsp3890A890DgCtgAt129129B.1.5760.116954
ORF1ab/nsp3890A890DgCtgAt9999B.1.5960.008627
ORF1ab/nsp3890A890DgCtgAt9393B.1.1770.001225
ORF1ab/nsp3890A890DgCtgAt8787B.1.20.000766
ORF1ab/nsp3890A890DgCtgAt7171B0.009075
ORF1ab/nsp3890A890DgCtgAt6666B.1.1600.002058
ORF1ab/nsp3890A890DgCtgAt6363B.1.1.2050.234201
ORF1ab/nsp3890A890DgCtgAt5959Q.51
ORF1ab/nsp3890A890DgCtgAt4848B.1.2210.00341
ORF1ab/nsp3890A890DgCtgAt4545P.10.000709
ORF1ab/nsp3890A890DgCtgAt4242B.1.5260.000987
ORF1ab/nsp3890A890DgCtgAt4040B.1.617.20.000151
ORF1ab/nsp3890A890DgCtgAt3838B.1.1.4090.107649
ORF1ab/nsp3890A890DgCtgAt3535AY.440.000213
ORF1ab/nsp3890A890DgCtgAt3333B.1.3510.000981
ORF1ab/nsp3890A890DgCtgAt3232B.1.177.70.005275
ORF1ab/nsp3890A890DgCtgAt3232B.1.6090.01534
ORF1ab/nsp3890A890DgCtgAt2929P.1.10.009212
ORF1ab/nsp3890A890DgCtgAt2222B.1.1.1610.077739
ORF1ab/nsp3890A890DgCtgAt1919B.1.1.5190.000755
ORF1ab/nsp3890A890DgCtgAt1818B.1.1.3120.034417
ORF1ab/nsp3890A890DgCtgAt1818B.1.4290.000424
ORF1ab/nsp3890A890DgCtgAt1717B.1.617.10.002192
ORF1ab/nsp3890A890DgCtgAt1414B.1.1.2200.026022
ORF1ab/nsp3890A890DgCtgAt1414B.1.6200.013245
ORF1ab/nsp3890A890DgCtgAt1313B.1.1.5280.0625
ORF1ab/nsp3890A890DgCtgAt1212B.1.1.390.006116
ORF1ab/nsp3890A890DgCtgAt1212B.1.1.5070.104348
ORF1ab/nsp3890A890DgCtgAt11110.611111
ORF1ab/nsp3890A890DgCtgAt1111AY.390.000272
ORF1ab/nsp3890A890DgCtgAt1111AY.430.000049
ORF1ab/nsp3890A890DgCtgAt1010P.1.160.003741
ORF1ab/nsp3890A890DgCtgAt99B.1.2580.000599
ORF1ab/nsp3890A890DgCtgAt99B.1.6370.000658
ORF1ab/nsp3890A890DgCtgAt88AY.1020.000212
ORF1ab/nsp3890A890DgCtgAt88B.1.5800.03252
ORF1ab/nsp3890A890DgCtgAt88B.1.6230.004292
ORF1ab/nsp3890A890DgCtgAt88C.370.000929
ORF1ab/nsp3890A890DgCtgAt88P.1.120.003872
ORF1ab/nsp3890A890DgCtgAt77AY.470.000218
ORF1ab/nsp3890A890DgCtgAt77B.1.4110.025926
ORF1ab/nsp3890A890DgCtgAt77C.36.30.003971
ORF1ab/nsp3890A890DgCtgAt77P.1.150.001626
ORF1ab/nsp3890A890DgCtgAt66B.1.1.500.004073
ORF1ab/nsp3890A890DgCtgAt66B.1.177.410.015
ORF1ab/nsp3890A890DgCtgAt66B.1.4270.000303
ORF1ab/nsp3890A890DgCtgAt66B.1.5330.057692
ORF1ab/nsp3890A890DgCtgAt55AY.300.001979
ORF1ab/nsp3890A890DgCtgAt55B.1.1.100.005574
ORF1ab/nsp3890A890DgCtgAt55B.1.1390.003666
ORF1ab/nsp3890A890DgCtgAt55B.1.2340.00066
ORF1ab/nsp3890A890DgCtgAt55B.1.2430.000348
ORF1ab/nsp3890A890DgCtgAt44A.2.50.001996
ORF1ab/nsp3890A890DgCtgAt44AD.20.000876
ORF1ab/nsp3890A890DgCtgAt44AY.250.000024
ORF1ab/nsp3890A890DgCtgAt44AY.450.000487
ORF1ab/nsp3890A890DgCtgAt44B.1.1.10.001307
ORF1ab/nsp3890A890DgCtgAt44B.1.1.280.001245
ORF1ab/nsp3890A890DgCtgAt44B.1.1.5240.083333
ORF1ab/nsp3890A890DgCtgAt44B.1.1.700.001364
ORF1ab/nsp3890A890DgCtgAt44B.1.3110.001098
ORF1ab/nsp3890A890DgCtgAt44B.1.3300.114286
ORF1ab/nsp3890A890DgCtgAt44B.1.5950.001044
ORF1ab/nsp3890A890DgCtgAt44B.1.5990.014599
ORF1ab/nsp3890A890DgCtgAt44B.1.6330.166667
ORF1ab/nsp3890A890DgCtgAt44P.1.60.007782
ORF1ab/nsp3890A890DgCtgAt44P.1.70.001277
ORF1ab/nsp3890A890DgCtgAt44R.10.00036
ORF1ab/nsp3890A890DgCtgAt33AY.230.000209
ORF1ab/nsp3890A890DgCtgAt33AY.260.000085
ORF1ab/nsp3890A890DgCtgAt33AY.520.002443
ORF1ab/nsp3890A890DgCtgAt33AY.75.10.000541
ORF1ab/nsp3890A890DgCtgAt33B.1.1.250.001706
ORF1ab/nsp3890A890DgCtgAt33B.1.1.3700.037975
ORF1ab/nsp3890A890DgCtgAt33B.1.1.5250.016393
ORF1ab/nsp3890A890DgCtgAt33B.1.160.160.002788
ORF1ab/nsp3890A890DgCtgAt33B.1.1700.012931
ORF1ab/nsp3890A890DgCtgAt33B.1.177.160.001993
ORF1ab/nsp3890A890DgCtgAt33B.1.177.310.034483
ORF1ab/nsp3890A890DgCtgAt33B.1.2140.010989
ORF1ab/nsp3890A890DgCtgAt33B.1.258.170.000312
ORF1ab/nsp3890A890DgCtgAt33B.1.3670.002377
ORF1ab/nsp3890A890DgCtgAt33B.1.4620.021739
ORF1ab/nsp3890A890DgCtgAt33B.1.6250.007059
ORF1ab/nsp3890A890DgCtgAt33B.1.780.025641
ORF1ab/nsp3890A890DgCtgAt22A0.000774
ORF1ab/nsp3890A890DgCtgAt22AY.1030.000012
ORF1ab/nsp3890A890DgCtgAt22AY.1170.000169
ORF1ab/nsp3890A890DgCtgAt22AY.290.000032
ORF1ab/nsp3890A890DgCtgAt22AY.4.2.10.000298
ORF1ab/nsp3890A890DgCtgAt22AY.50.000041
ORF1ab/nsp3890A890DgCtgAt22AY.670.000929
ORF1ab/nsp3890A890DgCtgAt22AY.680.000547
ORF1ab/nsp3890A890DgCtgAt22AY.750.000112
ORF1ab/nsp3890A890DgCtgAt22AY.920.000575
ORF1ab/nsp3890A890DgCtgAt22AZ.30.00304
ORF1ab/nsp3890A890DgCtgAt22B.1.1.1410.004024
ORF1ab/nsp3890A890DgCtgAt22B.1.1.2910.001485
ORF1ab/nsp3890A890DgCtgAt22B.1.1.2940.002532
ORF1ab/nsp3890A890DgCtgAt22B.1.1.2990.02439
ORF1ab/nsp3890A890DgCtgAt22B.1.1.3060.000877
ORF1ab/nsp3890A890DgCtgAt22B.1.1.3150.016949
ORF1ab/nsp3890A890DgCtgAt22B.1.1.3180.000604
ORF1ab/nsp3890A890DgCtgAt22B.1.1.3720.001377
ORF1ab/nsp3890A890DgCtgAt22B.1.1.3890.012121
ORF1ab/nsp3890A890DgCtgAt22B.1.1.4620.017241
ORF1ab/nsp3890A890DgCtgAt22B.1.177.500.00939
ORF1ab/nsp3890A890DgCtgAt22B.1.177.820.000955
ORF1ab/nsp3890A890DgCtgAt22B.1.2060.001631
ORF1ab/nsp3890A890DgCtgAt22B.1.214.30.014286
ORF1ab/nsp3890A890DgCtgAt22B.1.2370.00995
ORF1ab/nsp3890A890DgCtgAt22B.1.415.10.015152
ORF1ab/nsp3890A890DgCtgAt22B.1.466.20.000782
ORF1ab/nsp3890A890DgCtgAt22B.1.4700.002809
ORF1ab/nsp3890A890DgCtgAt22B.1.5300.014286
ORF1ab/nsp3890A890DgCtgAt22B.1.5640.000852
ORF1ab/nsp3890A890DgCtgAt22B.1.5750.000607
ORF1ab/nsp3890A890DgCtgAt22B.1.6190.001742
ORF1ab/nsp3890A890DgCtgAt22B.1.6280.000705
ORF1ab/nsp3890A890DgCtgAt22C.360.001821
ORF1ab/nsp3890A890DgCtgAt22P.1.10.10.01626
ORF1ab/nsp3890A890DgCtgAt22P.1.130.001797
ORF1ab/nsp3890A890DgCtgAt22P.1.170.000324
ORF1ab/nsp3890A890DgCtgAt22P.30.00319
ORF1ab/nsp3890A890DgCtgAt11A.2.5.20.001572
ORF1ab/nsp3890A890DgCtgAt11A.210.00277
ORF1ab/nsp3890A890DgCtgAt11A.270.001656
ORF1ab/nsp3890A890DgCtgAt11A.70.055556
ORF1ab/nsp3890A890DgCtgAt11AT.10.005128
ORF1ab/nsp3890A890DgCtgAt11AY.120.000316
ORF1ab/nsp3890A890DgCtgAt11AY.1210.000135
ORF1ab/nsp3890A890DgCtgAt11AY.130.000161
ORF1ab/nsp3890A890DgCtgAt11AY.20.000356
ORF1ab/nsp3890A890DgCtgAt11AY.350.000233
ORF1ab/nsp3890A890DgCtgAt11AY.360.000148
ORF1ab/nsp3890A890DgCtgAt11AY.4.50.000107
ORF1ab/nsp3890A890DgCtgAt11AY.460.000104
ORF1ab/nsp3890A890DgCtgAt11AY.46.60.000072
ORF1ab/nsp3890A890DgCtgAt11AY.5.40.000277
ORF1ab/nsp3890A890DgCtgAt11AY.530.000288
ORF1ab/nsp3890A890DgCtgAt11AY.610.000105
ORF1ab/nsp3890A890DgCtgAt11AY.620.000436
ORF1ab/nsp3890A890DgCtgAt11AY.70.000196
ORF1ab/nsp3890A890DgCtgAt11AY.700.000209
ORF1ab/nsp3890A890DgCtgAt11AY.90.000068
ORF1ab/nsp3890A890DgCtgAt11AY.930.000273
ORF1ab/nsp3890A890DgCtgAt11AY.950.000761
ORF1ab/nsp3890A890DgCtgAt11AY.980.000079
ORF1ab/nsp3890A890DgCtgAt11B.1.1.1350.004695
ORF1ab/nsp3890A890DgCtgAt11B.1.1.1530.001095
ORF1ab/nsp3890A890DgCtgAt11B.1.1.1710.003676
ORF1ab/nsp3890A890DgCtgAt11B.1.1.1870.00885
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2070.001182
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2210.010101
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2310.003096
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2360.006897
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2370.005405
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2540.011236
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2580.003257
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2690.001353
ORF1ab/nsp3890A890DgCtgAt11B.1.1.2770.000759
ORF1ab/nsp3890A890DgCtgAt11B.1.1.3010.001179
ORF1ab/nsp3890A890DgCtgAt11B.1.1.3110.000358
ORF1ab/nsp3890A890DgCtgAt11B.1.1.3170.000412
ORF1ab/nsp3890A890DgCtgAt11B.1.1.340.013158
ORF1ab/nsp3890A890DgCtgAt11B.1.1.3740.002375
ORF1ab/nsp3890A890DgCtgAt11B.1.1.4060.006494
ORF1ab/nsp3890A890DgCtgAt11B.1.1.4370.010417
ORF1ab/nsp3890A890DgCtgAt11B.1.1.440.00241
ORF1ab/nsp3890A890DgCtgAt11B.1.1.4480.002033
ORF1ab/nsp3890A890DgCtgAt11B.1.1.5230.001563
ORF1ab/nsp3890A890DgCtgAt11B.1.1.550.012987
ORF1ab/nsp3890A890DgCtgAt11B.1.1.630.000386
ORF1ab/nsp3890A890DgCtgAt11B.1.1.830.00271
ORF1ab/nsp3890A890DgCtgAt11B.1.1.890.006061
ORF1ab/nsp3890A890DgCtgAt11B.1.1.990.02381
ORF1ab/nsp3890A890DgCtgAt11B.1.110.30.000718
ORF1ab/nsp3890A890DgCtgAt11B.1.1400.018868
ORF1ab/nsp3890A890DgCtgAt11B.1.1430.021277
ORF1ab/nsp3890A890DgCtgAt11B.1.1570.002985
ORF1ab/nsp3890A890DgCtgAt11B.1.160.100.008065
ORF1ab/nsp3890A890DgCtgAt11B.1.160.130.027778
ORF1ab/nsp3890A890DgCtgAt11B.1.160.140.002119
ORF1ab/nsp3890A890DgCtgAt11B.1.160.170.001701
ORF1ab/nsp3890A890DgCtgAt11B.1.160.240.004425
ORF1ab/nsp3890A890DgCtgAt11B.1.160.260.002421
ORF1ab/nsp3890A890DgCtgAt11B.1.160.70.002079
ORF1ab/nsp3890A890DgCtgAt11B.1.160.80.001289
ORF1ab/nsp3890A890DgCtgAt11B.1.177.150.000631
ORF1ab/nsp3890A890DgCtgAt11B.1.177.210.000076
ORF1ab/nsp3890A890DgCtgAt11B.1.177.350.000691
ORF1ab/nsp3890A890DgCtgAt11B.1.177.420.000894
ORF1ab/nsp3890A890DgCtgAt11B.1.177.440.000519
ORF1ab/nsp3890A890DgCtgAt11B.1.177.510.004566
ORF1ab/nsp3890A890DgCtgAt11B.1.177.520.001757
ORF1ab/nsp3890A890DgCtgAt11B.1.177.540.000606
ORF1ab/nsp3890A890DgCtgAt11B.1.177.580.001332
ORF1ab/nsp3890A890DgCtgAt11B.1.177.600.000218
ORF1ab/nsp3890A890DgCtgAt11B.1.177.670.007634
ORF1ab/nsp3890A890DgCtgAt11B.1.177.810.000189
ORF1ab/nsp3890A890DgCtgAt11B.1.177.860.000183
ORF1ab/nsp3890A890DgCtgAt11B.1.177.90.001332
ORF1ab/nsp3890A890DgCtgAt11B.1.1790.003759
ORF1ab/nsp3890A890DgCtgAt11B.1.214.20.0006
ORF1ab/nsp3890A890DgCtgAt11B.1.2390.001221
ORF1ab/nsp3890A890DgCtgAt11B.1.258.140.00098
ORF1ab/nsp3890A890DgCtgAt11B.1.2650.001271
ORF1ab/nsp3890A890DgCtgAt11B.1.2680.010417
ORF1ab/nsp3890A890DgCtgAt11B.1.3490.000715
ORF1ab/nsp3890A890DgCtgAt11B.1.360.000146
ORF1ab/nsp3890A890DgCtgAt11B.1.36.10.00114
ORF1ab/nsp3890A890DgCtgAt11B.1.3690.000285
ORF1ab/nsp3890A890DgCtgAt11B.1.3800.006623
ORF1ab/nsp3890A890DgCtgAt11B.1.3810.007812
ORF1ab/nsp3890A890DgCtgAt11B.1.3990.001934
ORF1ab/nsp3890A890DgCtgAt11B.1.4280.00102
ORF1ab/nsp3890A890DgCtgAt11B.1.4330.003195
ORF1ab/nsp3890A890DgCtgAt11B.1.4730.019231
ORF1ab/nsp3890A890DgCtgAt11B.1.4970.000315
ORF1ab/nsp3890A890DgCtgAt11B.1.5170.000427
ORF1ab/nsp3890A890DgCtgAt11B.1.5210.004975
ORF1ab/nsp3890A890DgCtgAt11B.1.5610.000397
ORF1ab/nsp3890A890DgCtgAt11B.1.5740.002151
ORF1ab/nsp3890A890DgCtgAt11B.1.6210.000089
ORF1ab/nsp3890A890DgCtgAt11B.1.6270.00202
ORF1ab/nsp3890A890DgCtgAt11B.1.940.027027
ORF1ab/nsp3890A890DgCtgAt11C.37.10.002618
ORF1ab/nsp3890A890DgCtgAt11N.50.001767
ORF1ab/nsp3890A890DgCtgAt11P.1.100.000269