CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A667T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3667A667TA1485TnonsynGcgAcg3723700.9946244718-4720
ORF1ab/nsp3667A667TA1485TnonsynGcGAcC37220.005376344718-4720

Details of the mutation A667T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3667A667TGcgAcg370372All0.000071
ORF1ab/nsp3667A667TGcGAcC2372All0
ORF1ab/nsp3667A667TGcgAcg189189AY.430.000837
ORF1ab/nsp3667A667TGcgAcg6767AY.420.002695
ORF1ab/nsp3667A667TGcgAcg2222B.1.1.70.00002
ORF1ab/nsp3667A667TGcgAcg1818AY.120.005689
ORF1ab/nsp3667A667TGcgAcg1717AY.7.10.001916
ORF1ab/nsp3667A667TGcgAcg1111B.1.1.2140.00061
ORF1ab/nsp3667A667TGcgAcg55AY.40.000008
ORF1ab/nsp3667A667TGcgAcg44B.1.5250.000453
ORF1ab/nsp3667A667TGcgAcg33AY.46.40.000494
ORF1ab/nsp3667A667TGcgAcg33B.1.4110.011111
ORF1ab/nsp3667A667TGcgAcg33B.1.617.10.000387
ORF1ab/nsp3667A667TGcGAcC220.111111
ORF1ab/nsp3667A667TGcgAcg22AY.250.000012
ORF1ab/nsp3667A667TGcgAcg22AY.4.50.000215
ORF1ab/nsp3667A667TGcgAcg22B.1.1.4340.000697
ORF1ab/nsp3667A667TGcgAcg22B.1.617.20.000008
ORF1ab/nsp3667A667TGcgAcg22C.36.30.001134
ORF1ab/nsp3667A667TGcgAcg22P.10.000032
ORF1ab/nsp3667A667TGcgAcg22P.1.70.000639
ORF1ab/nsp3667A667TGcgAcg11AY.1030.000006
ORF1ab/nsp3667A667TGcgAcg11AY.30.00001
ORF1ab/nsp3667A667TGcgAcg11AY.440.000006
ORF1ab/nsp3667A667TGcgAcg11AY.450.000122
ORF1ab/nsp3667A667TGcgAcg11AY.460.000104
ORF1ab/nsp3667A667TGcgAcg11B.1.1.2220.000204
ORF1ab/nsp3667A667TGcgAcg11B.1.110.30.000718
ORF1ab/nsp3667A667TGcgAcg11B.1.4160.001269
ORF1ab/nsp3667A667TGcgAcg11B.1.4290.000024
ORF1ab/nsp3667A667TGcgAcg11B.1.5950.000261
ORF1ab/nsp3667A667TGcgAcg11B.1.6220.012987
ORF1ab/nsp3667A667TGcgAcg11D.20.000075
ORF1ab/nsp3667A667TGcgAcg11P.30.001595
ORF1ab/nsp3667A667TGcgAcg11Q.80.000165