CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A58T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp358A58TA876TnonsynGcaAca255125490.9992162891-2893
ORF1ab/nsp358A58TA876TnonsynGcAAcT255120.0007840062891-2893

Details of the mutation A58T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp358A58TGcaAca25492551All0.000488
ORF1ab/nsp358A58TGcAAcT22551All0
ORF1ab/nsp358A58TGcaAca11821182B.30.981728
ORF1ab/nsp358A58TGcaAca599599B.3.10.993367
ORF1ab/nsp358A58TGcaAca132132AY.4.10.097345
ORF1ab/nsp358A58TGcaAca117117B.1.4680.668571
ORF1ab/nsp358A58TGcaAca113113AY.250.00068
ORF1ab/nsp358A58TGcaAca4242AY.430.000186
ORF1ab/nsp358A58TGcaAca3939AY.1030.000242
ORF1ab/nsp358A58TGcaAca3838B.1.1.70.000034
ORF1ab/nsp358A58TGcaAca3737AY.40.000058
ORF1ab/nsp358A58TGcaAca3737B.1.617.20.000139
ORF1ab/nsp358A58TGcaAca2020B0.002556
ORF1ab/nsp358A58TGcaAca1717B.1.1.3020.03527
ORF1ab/nsp358A58TGcaAca1212AY.30.000119
ORF1ab/nsp358A58TGcaAca1111B.1.1.2220.002244
ORF1ab/nsp358A58TGcaAca1010B.10.000092
ORF1ab/nsp358A58TGcaAca1010B.1.20.000088
ORF1ab/nsp358A58TGcaAca88AY.1190.000282
ORF1ab/nsp358A58TGcaAca88B.1.6370.000585
ORF1ab/nsp358A58TGcaAca77AY.290.00011
ORF1ab/nsp358A58TGcaAca77B.1.258.160.011457
ORF1ab/nsp358A58TGcaAca66B.1.1.370.001157
ORF1ab/nsp358A58TGcaAca66B.1.1770.000079
ORF1ab/nsp358A58TGcaAca66P.10.000095
ORF1ab/nsp358A58TGcaAca55AY.1020.000133
ORF1ab/nsp358A58TGcaAca55AY.370.00158
ORF1ab/nsp358A58TGcaAca55AY.390.000124
ORF1ab/nsp358A58TGcaAca55B.1.3610.006443
ORF1ab/nsp358A58TGcaAca44B.1.1.3170.001647
ORF1ab/nsp358A58TGcaAca33AY.1180.000188
ORF1ab/nsp358A58TGcaAca33B.1.10.000054
ORF1ab/nsp358A58TGcAAcT220.111111
ORF1ab/nsp358A58TGcaAca22AY.420.00008
ORF1ab/nsp358A58TGcaAca22AY.440.000012
ORF1ab/nsp358A58TGcaAca22AY.470.000062
ORF1ab/nsp358A58TGcaAca22AY.480.00093
ORF1ab/nsp358A58TGcaAca22AY.980.000158
ORF1ab/nsp358A58TGcaAca22B.1.1.5190.000079
ORF1ab/nsp358A58TGcaAca22B.1.360.000292
ORF1ab/nsp358A58TGcaAca22B.1.36.220.002415
ORF1ab/nsp358A58TGcaAca22B.1.5960.000174
ORF1ab/nsp358A58TGcaAca22B.550.0059
ORF1ab/nsp358A58TGcaAca22B.60.00182
ORF1ab/nsp358A58TGcaAca22P.1.100.000539
ORF1ab/nsp358A58TGcaAca22P.20.000373
ORF1ab/nsp358A58TGcaAca11A.2.5.10.004808
ORF1ab/nsp358A58TGcaAca11AU.30.00211
ORF1ab/nsp358A58TGcaAca11AY.100.00053
ORF1ab/nsp358A58TGcaAca11AY.1000.000046
ORF1ab/nsp358A58TGcaAca11AY.1080.001103
ORF1ab/nsp358A58TGcaAca11AY.1200.000037
ORF1ab/nsp358A58TGcaAca11AY.39.10.00004
ORF1ab/nsp358A58TGcaAca11AY.4.40.000409
ORF1ab/nsp358A58TGcaAca11AY.450.000122
ORF1ab/nsp358A58TGcaAca11AY.460.000104
ORF1ab/nsp358A58TGcaAca11AY.50.000021
ORF1ab/nsp358A58TGcaAca11AY.590.00053
ORF1ab/nsp358A58TGcaAca11B.1.1.2940.001266
ORF1ab/nsp358A58TGcaAca11B.1.1.4090.002833
ORF1ab/nsp358A58TGcaAca11B.1.110.30.000718
ORF1ab/nsp358A58TGcaAca11B.1.1470.000756
ORF1ab/nsp358A58TGcaAca11B.1.3670.000792
ORF1ab/nsp358A58TGcaAca11B.1.3990.001934
ORF1ab/nsp358A58TGcaAca11B.1.4270.00005
ORF1ab/nsp358A58TGcaAca11B.1.438.10.000107
ORF1ab/nsp358A58TGcaAca11B.1.4670.04
ORF1ab/nsp358A58TGcaAca11B.1.5610.000397
ORF1ab/nsp358A58TGcaAca11B.1.5810.009434
ORF1ab/nsp358A58TGcaAca11B.1.90.006173
ORF1ab/nsp358A58TGcaAca11B.280.003279
ORF1ab/nsp358A58TGcaAca11B.6.60.000889
ORF1ab/nsp358A58TGcaAca11P.1.170.000162
ORF1ab/nsp358A58TGcaAca11P.1.60.001946
ORF1ab/nsp358A58TGcaAca11Q.10.000126