CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A579del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3579A579delA1397deldelGCC---848414454-4456

Details of the mutation A579del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3579A579delGCC---8484All0.000016
ORF1ab/nsp3579A579delGCC---2121B.1.1.70.000019
ORF1ab/nsp3579A579delGCC---55B.10.000046
ORF1ab/nsp3579A579delGCC---55B.1.1770.000066
ORF1ab/nsp3579A579delGCC---44AY.40.000006
ORF1ab/nsp3579A579delGCC---33B.1.20.000026
ORF1ab/nsp3579A579delGCC---22A0.000774
ORF1ab/nsp3579A579delGCC---22AY.1110.000366
ORF1ab/nsp3579A579delGCC---22AY.9.10.000167
ORF1ab/nsp3579A579delGCC---22B.1.2140.007326
ORF1ab/nsp3579A579delGCC---22B.1.617.20.000008
ORF1ab/nsp3579A579delGCC---22B.1.6210.000177
ORF1ab/nsp3579A579delGCC---22P.10.000032
ORF1ab/nsp3579A579delGCC---11A.2.20.001689
ORF1ab/nsp3579A579delGCC---11AY.1180.000063
ORF1ab/nsp3579A579delGCC---11AY.230.00007
ORF1ab/nsp3579A579delGCC---11AY.350.000233
ORF1ab/nsp3579A579delGCC---11AY.4.50.000107
ORF1ab/nsp3579A579delGCC---11AY.430.000004
ORF1ab/nsp3579A579delGCC---11AY.520.000814
ORF1ab/nsp3579A579delGCC---11AY.670.000464
ORF1ab/nsp3579A579delGCC---11AY.750.000056
ORF1ab/nsp3579A579delGCC---11AY.75.10.00018
ORF1ab/nsp3579A579delGCC---11AY.950.000761
ORF1ab/nsp3579A579delGCC---11B0.000128
ORF1ab/nsp3579A579delGCC---11B.1.10.000018
ORF1ab/nsp3579A579delGCC---11B.1.1.100.001115
ORF1ab/nsp3579A579delGCC---11B.1.1.1420.017544
ORF1ab/nsp3579A579delGCC---11B.1.1.3150.008475
ORF1ab/nsp3579A579delGCC---11B.1.1.390.00051
ORF1ab/nsp3579A579delGCC---11B.1.1.4090.002833
ORF1ab/nsp3579A579delGCC---11B.1.1.5190.00004
ORF1ab/nsp3579A579delGCC---11B.1.1570.002985
ORF1ab/nsp3579A579delGCC---11B.1.177.170.000821
ORF1ab/nsp3579A579delGCC---11B.1.177.40.000211
ORF1ab/nsp3579A579delGCC---11B.1.177.560.000668
ORF1ab/nsp3579A579delGCC---11B.1.177.870.000728
ORF1ab/nsp3579A579delGCC---11B.1.2210.000071
ORF1ab/nsp3579A579delGCC---11B.1.3190.003049
ORF1ab/nsp3579A579delGCC---11B.1.3510.00003
ORF1ab/nsp3579A579delGCC---11B.1.360.000146
ORF1ab/nsp3579A579delGCC---11B.1.5760.000907
ORF1ab/nsp3579A579delGCC---11B.1.617.30.002985
ORF1ab/nsp3579A579delGCC---11B.150.017544
ORF1ab/nsp3579A579delGCC---11P.1.40.000977