CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A579V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3579A579VA1397VnonsyngCcgTc14370143550.9989564454-4456
ORF1ab/nsp3579A579VA1397VnonsyngCCgTT14370140.0009742524454-4456
ORF1ab/nsp3579A579VA1397VnonsyngCCgTA1437010.00006958944454-4456

Details of the mutation A579V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3579A579VgCcgTc1435514370All0.002746
ORF1ab/nsp3579A579VgCCgTT1414370All0.000003
ORF1ab/nsp3579A579VgCCgTA114370All0
ORF1ab/nsp3579A579VgCcgTc48284828B.1.617.20.018179
ORF1ab/nsp3579A579VgCcgTc30293029AY.1190.106949
ORF1ab/nsp3579A579VgCcgTc18451845AY.430.008174
ORF1ab/nsp3579A579VgCcgTc867872B.1.1.70.000776
ORF1ab/nsp3579A579VgCCgTT5872B.1.1.70.000004
ORF1ab/nsp3579A579VgCcgTc273273AY.390.006746
ORF1ab/nsp3579A579VgCcgTc271271B.1.20.002386
ORF1ab/nsp3579A579VgCcgTc219219B.1.5050.960526
ORF1ab/nsp3579A579VgCcgTc198198AY.440.001205
ORF1ab/nsp3579A579VgCcgTc184184AY.40.000286
ORF1ab/nsp3579A579VgCcgTc180180B.1.1770.00237
ORF1ab/nsp3579A579VgCcgTc153153P.10.00241
ORF1ab/nsp3579A579VgCcgTc142142B.1.2210.010087
ORF1ab/nsp3579A579VgCcgTc126128AY.250.000758
ORF1ab/nsp3579A579VgCCgTT2128AY.250.000012
ORF1ab/nsp3579A579VgCcgTc100100AY.590.052966
ORF1ab/nsp3579A579VgCcgTc9191B.10.000834
ORF1ab/nsp3579A579VgCcgTc8686B.1.1.280.026766
ORF1ab/nsp3579A579VgCcgTc8686B.1.5930.934783
ORF1ab/nsp3579A579VgCcgTc8383AY.1020.002201
ORF1ab/nsp3579A579VgCcgTc8282AY.460.008535
ORF1ab/nsp3579A579VgCcgTc6969B.1.10.001252
ORF1ab/nsp3579A579VgCcgTc5959AY.5.30.019906
ORF1ab/nsp3579A579VgCcgTc5757AY.1030.000354
ORF1ab/nsp3579A579VgCcgTc5353AY.100.028087
ORF1ab/nsp3579A579VgCcgTc5152AY.30.000507
ORF1ab/nsp3579A579VgCCgTT152AY.30.00001
ORF1ab/nsp3579A579VgCcgTc4850AY.230.003348
ORF1ab/nsp3579A579VgCCgTA150AY.230.00007
ORF1ab/nsp3579A579VgCCgTT150AY.230.00007
ORF1ab/nsp3579A579VgCcgTc4646B.1.1600.001435
ORF1ab/nsp3579A579VgCcgTc4141AY.99.20.003778
ORF1ab/nsp3579A579VgCcgTc3939AY.1170.003296
ORF1ab/nsp3579A579VgCcgTc3737B.1.1.370.007136
ORF1ab/nsp3579A579VgCcgTc3536AY.60.001439
ORF1ab/nsp3579A579VgCCgTT136AY.60.000041
ORF1ab/nsp3579A579VgCcgTc3535AY.39.10.001386
ORF1ab/nsp3579A579VgCcgTc3434B.1.4290.0008
ORF1ab/nsp3579A579VgCcgTc3030AY.50.000619
ORF1ab/nsp3579A579VgCcgTc2424AY.320.01278
ORF1ab/nsp3579A579VgCcgTc2222AY.5.40.006087
ORF1ab/nsp3579A579VgCcgTc2121B.1.5270.077778
ORF1ab/nsp3579A579VgCcgTc1919B.1.1.2840.002041
ORF1ab/nsp3579A579VgCcgTc1919B.1.4270.000959
ORF1ab/nsp3579A579VgCcgTc1818B.1.2580.001198
ORF1ab/nsp3579A579VgCcgTc1717B.1.1.3280.288136
ORF1ab/nsp3579A579VgCcgTc1717B.1.5250.001924
ORF1ab/nsp3579A579VgCcgTc1616AY.200.000622
ORF1ab/nsp3579A579VgCcgTc1414AY.290.000221
ORF1ab/nsp3579A579VgCcgTc1313AY.34.10.006629
ORF1ab/nsp3579A579VgCcgTc1313AY.450.001582
ORF1ab/nsp3579A579VgCcgTc1313AY.740.001503
ORF1ab/nsp3579A579VgCcgTc1313B.1.214.30.092857
ORF1ab/nsp3579A579VgCcgTc1212AY.1000.000552
ORF1ab/nsp3579A579VgCcgTc1212AY.470.000373
ORF1ab/nsp3579A579VgCcgTc1212AY.750.000672
ORF1ab/nsp3579A579VgCcgTc1212B.1.1150.26087
ORF1ab/nsp3579A579VgCcgTc1212B.1.360.001751
ORF1ab/nsp3579A579VgCcgTc1212B.1.6210.001062
ORF1ab/nsp3579A579VgCcgTc1111AY.9.20.000404
ORF1ab/nsp3579A579VgCcgTc1111B.1.1.3180.003319
ORF1ab/nsp3579A579VgCcgTc1111B.1.2410.008929
ORF1ab/nsp3579A579VgCcgTc1111B.1.3510.000327
ORF1ab/nsp3579A579VgCcgTc1010B.1.5610.00397
ORF1ab/nsp3579A579VgCcgTc1010B.1.5960.000871
ORF1ab/nsp3579A579VgCcgTc1010P.1.150.002323
ORF1ab/nsp3579A579VgCcgTc99A.50.017308
ORF1ab/nsp3579A579VgCcgTc99AY.260.000255
ORF1ab/nsp3579A579VgCcgTc99B.1.177.860.001651
ORF1ab/nsp3579A579VgCcgTc99D.20.000675
ORF1ab/nsp3579A579VgCcgTc88AY.1050.005145
ORF1ab/nsp3579A579VgCcgTc88AY.9.10.00067
ORF1ab/nsp3579A579VgCcgTc88B.1.5260.000188
ORF1ab/nsp3579A579VgCcgTc77AY.1210.000947
ORF1ab/nsp3579A579VgCcgTc77AY.620.00305
ORF1ab/nsp3579A579VgCcgTc77AY.640.004167
ORF1ab/nsp3579A579VgCcgTc77B.1.5240.009845
ORF1ab/nsp3579A579VgCcgTc77C.10.016746
ORF1ab/nsp3579A579VgCcgTc66AY.116.10.001869
ORF1ab/nsp3579A579VgCcgTc66AY.330.000401
ORF1ab/nsp3579A579VgCcgTc66AY.360.000889
ORF1ab/nsp3579A579VgCcgTc66AY.46.60.000433
ORF1ab/nsp3579A579VgCcgTc66AY.920.001724
ORF1ab/nsp3579A579VgCcgTc66B.1.177.600.001311
ORF1ab/nsp3579A579VgCcgTc66B.1.3810.046875
ORF1ab/nsp3579A579VgCcgTc66P.1.10.001906
ORF1ab/nsp3579A579VgCcgTc66P.1.70.001916
ORF1ab/nsp3579A579VgCcgTc55AY.1180.000313
ORF1ab/nsp3579A579VgCcgTc55AY.4.20.000108
ORF1ab/nsp3579A579VgCcgTc55AY.420.000201
ORF1ab/nsp3579A579VgCcgTc55B.1.1.2630.007788
ORF1ab/nsp3579A579VgCcgTc55B.1.1.4200.00503
ORF1ab/nsp3579A579VgCcgTc55B.1.1.5190.000199
ORF1ab/nsp3579A579VgCcgTc55B.1.177.810.000947
ORF1ab/nsp3579A579VgCcgTc55B.1.2340.00066
ORF1ab/nsp3579A579VgCcgTc55B.1.438.10.000536
ORF1ab/nsp3579A579VgCcgTc44AY.1160.001147
ORF1ab/nsp3579A579VgCcgTc44AY.580.00363
ORF1ab/nsp3579A579VgCcgTc44AY.960.008299
ORF1ab/nsp3579A579VgCcgTc44AY.990.004197
ORF1ab/nsp3579A579VgCcgTc44B.1.1.2140.000222
ORF1ab/nsp3579A579VgCcgTc44B.1.1.390.002039
ORF1ab/nsp3579A579VgCcgTc44B.1.1.5170.027211
ORF1ab/nsp3579A579VgCcgTc44B.1.1.700.001364
ORF1ab/nsp3579A579VgCcgTc44B.1.258.170.000416
ORF1ab/nsp3579A579VgCcgTc44B.1.36.270.003053
ORF1ab/nsp3579A579VgCcgTc44B.1.4650.015209
ORF1ab/nsp3579A579VgCcgTc44B.1.5510.005161
ORF1ab/nsp3579A579VgCcgTc44B.1.617.10.000516
ORF1ab/nsp3579A579VgCcgTc44P.1.140.000191
ORF1ab/nsp3579A579VgCcgTc44Q.10.000505
ORF1ab/nsp3579A579VgCcgTc44R.10.00036
ORF1ab/nsp3579A579VgCcgTc33AY.1060.001005
ORF1ab/nsp3579A579VgCCgTT33AY.1110.000549
ORF1ab/nsp3579A579VgCcgTc33AY.270.000194
ORF1ab/nsp3579A579VgCcgTc33AY.370.000948
ORF1ab/nsp3579A579VgCcgTc33AY.410.000882
ORF1ab/nsp3579A579VgCcgTc33AY.480.001395
ORF1ab/nsp3579A579VgCcgTc33AY.540.000286
ORF1ab/nsp3579A579VgCcgTc33AY.610.000314
ORF1ab/nsp3579A579VgCcgTc33AY.690.00056
ORF1ab/nsp3579A579VgCcgTc33AY.910.002191
ORF1ab/nsp3579A579VgCcgTc33AY.950.002283
ORF1ab/nsp3579A579VgCcgTc33AY.98.10.000145
ORF1ab/nsp3579A579VgCcgTc33B.1.1.1890.004539
ORF1ab/nsp3579A579VgCcgTc33B.1.1.3260.005282
ORF1ab/nsp3579A579VgCcgTc33B.1.177.570.000843
ORF1ab/nsp3579A579VgCcgTc33B.1.2430.000209
ORF1ab/nsp3579A579VgCcgTc33B.1.36.160.004274
ORF1ab/nsp3579A579VgCcgTc33B.1.36.290.001552
ORF1ab/nsp3579A579VgCcgTc33B.1.3710.003367
ORF1ab/nsp3579A579VgCcgTc33B.1.4970.000944
ORF1ab/nsp3579A579VgCcgTc33B.1.6090.001438
ORF1ab/nsp3579A579VgCcgTc33C.260.022059
ORF1ab/nsp3579A579VgCcgTc33P.1.120.001452
ORF1ab/nsp3579A579VgCcgTc33P.1.40.00293
ORF1ab/nsp3579A579VgCcgTc33Q.80.000495
ORF1ab/nsp3579A579VgCcgTc22A0.000774
ORF1ab/nsp3579A579VgCcgTc22AD.20.000438
ORF1ab/nsp3579A579VgCcgTc22AY.1010.000981
ORF1ab/nsp3579A579VgCcgTc22AY.1130.000285
ORF1ab/nsp3579A579VgCcgTc22AY.1140.000462
ORF1ab/nsp3579A579VgCcgTc22AY.1200.000074
ORF1ab/nsp3579A579VgCcgTc22AY.240.000862
ORF1ab/nsp3579A579VgCcgTc22AY.3.10.000171
ORF1ab/nsp3579A579VgCcgTc22AY.380.000999
ORF1ab/nsp3579A579VgCcgTc22AY.4.30.001684
ORF1ab/nsp3579A579VgCcgTc22AY.4.50.000215
ORF1ab/nsp3579A579VgCcgTc22AY.46.10.002053
ORF1ab/nsp3579A579VgCcgTc22AY.46.20.001271
ORF1ab/nsp3579A579VgCcgTc22AY.520.001629
ORF1ab/nsp3579A579VgCcgTc22AY.560.00321
ORF1ab/nsp3579A579VgCcgTc22AY.670.000929
ORF1ab/nsp3579A579VgCcgTc22AY.840.000875
ORF1ab/nsp3579A579VgCcgTc22AY.90.000135
ORF1ab/nsp3579A579VgCcgTc22AY.900.001369
ORF1ab/nsp3579A579VgCcgTc22B0.000256
ORF1ab/nsp3579A579VgCcgTc22B.1.1.1590.009346
ORF1ab/nsp3579A579VgCcgTc22B.1.1.2160.001781
ORF1ab/nsp3579A579VgCcgTc22B.1.1.2220.000408
ORF1ab/nsp3579A579VgCcgTc22B.1.1.2650.006309
ORF1ab/nsp3579A579VgCcgTc22B.1.1.3060.000877
ORF1ab/nsp3579A579VgCcgTc22B.1.1.3480.001592
ORF1ab/nsp3579A579VgCcgTc22B.1.1.500.001358
ORF1ab/nsp3579A579VgCcgTc22B.1.177.440.001038
ORF1ab/nsp3579A579VgCcgTc22B.1.177.730.001133
ORF1ab/nsp3579A579VgCcgTc22B.1.177.830.002963
ORF1ab/nsp3579A579VgCcgTc22B.1.3610.002577
ORF1ab/nsp3579A579VgCcgTc22B.1.3800.013245
ORF1ab/nsp3579A579VgCcgTc22B.1.4330.00639
ORF1ab/nsp3579A579VgCcgTc22B.1.5040.0625
ORF1ab/nsp3579A579VgCcgTc22B.1.5600.009259
ORF1ab/nsp3579A579VgCcgTc22B.400.000729
ORF1ab/nsp3579A579VgCcgTc11A.10.000282
ORF1ab/nsp3579A579VgCcgTc11A.2.20.001689
ORF1ab/nsp3579A579VgCcgTc11A.2.50.000499
ORF1ab/nsp3579A579VgCcgTc11A.2.5.10.004808
ORF1ab/nsp3579A579VgCcgTc11A.250.018182
ORF1ab/nsp3579A579VgCcgTc11AE.80.000489
ORF1ab/nsp3579A579VgCcgTc11AH.30.003802
ORF1ab/nsp3579A579VgCcgTc11AY.1080.001103
ORF1ab/nsp3579A579VgCcgTc11AY.1090.00074
ORF1ab/nsp3579A579VgCcgTc11AY.120.10.000321
ORF1ab/nsp3579A579VgCcgTc11AY.120.2.10.000498
ORF1ab/nsp3579A579VgCcgTc11AY.140.000088
ORF1ab/nsp3579A579VgCcgTc11AY.16.10.00047
ORF1ab/nsp3579A579VgCcgTc11AY.23.10.000417
ORF1ab/nsp3579A579VgCcgTc11AY.280.00189
ORF1ab/nsp3579A579VgCcgTc11AY.350.000233
ORF1ab/nsp3579A579VgCcgTc11AY.4.40.000409
ORF1ab/nsp3579A579VgCcgTc11AY.46.40.000165
ORF1ab/nsp3579A579VgCcgTc11AY.680.000274
ORF1ab/nsp3579A579VgCcgTc11AY.700.000209
ORF1ab/nsp3579A579VgCcgTc11AY.75.10.00018
ORF1ab/nsp3579A579VgCcgTc11AY.770.001127
ORF1ab/nsp3579A579VgCcgTc11AY.80.000606
ORF1ab/nsp3579A579VgCcgTc11AY.850.000427
ORF1ab/nsp3579A579VgCcgTc11AY.880.000884
ORF1ab/nsp3579A579VgCcgTc11AY.890.004902
ORF1ab/nsp3579A579VgCcgTc11AY.930.000273
ORF1ab/nsp3579A579VgCcgTc11AY.980.000079
ORF1ab/nsp3579A579VgCcgTc11AY.99.10.001553
ORF1ab/nsp3579A579VgCcgTc11B.1.1.10.000327
ORF1ab/nsp3579A579VgCcgTc11B.1.1.1210.002427
ORF1ab/nsp3579A579VgCcgTc11B.1.1.1700.001247
ORF1ab/nsp3579A579VgCcgTc11B.1.1.1710.003676
ORF1ab/nsp3579A579VgCcgTc11B.1.1.1760.000439
ORF1ab/nsp3579A579VgCcgTc11B.1.1.1920.002309
ORF1ab/nsp3579A579VgCcgTc11B.1.1.2070.001182
ORF1ab/nsp3579A579VgCcgTc11B.1.1.2320.001815
ORF1ab/nsp3579A579VgCcgTc11B.1.1.250.000569
ORF1ab/nsp3579A579VgCcgTc11B.1.1.2550.00303
ORF1ab/nsp3579A579VgCCgTT11B.1.1.2710.055556
ORF1ab/nsp3579A579VgCcgTc11B.1.1.2860.002899
ORF1ab/nsp3579A579VgCcgTc11B.1.1.2880.001916
ORF1ab/nsp3579A579VgCcgTc11B.1.1.3040.002809
ORF1ab/nsp3579A579VgCcgTc11B.1.1.3560.008547
ORF1ab/nsp3579A579VgCcgTc11B.1.1.3780.007299
ORF1ab/nsp3579A579VgCcgTc11B.1.1.3980.003226
ORF1ab/nsp3579A579VgCcgTc11B.1.1.4320.001266
ORF1ab/nsp3579A579VgCcgTc11B.1.1.630.000386
ORF1ab/nsp3579A579VgCcgTc11B.1.1260.001276
ORF1ab/nsp3579A579VgCcgTc11B.1.1420.002899
ORF1ab/nsp3579A579VgCcgTc11B.1.160.320.004292
ORF1ab/nsp3579A579VgCcgTc11B.1.177.310.011494
ORF1ab/nsp3579A579VgCcgTc11B.1.177.530.002392
ORF1ab/nsp3579A579VgCcgTc11B.1.177.580.001332
ORF1ab/nsp3579A579VgCcgTc11B.1.177.80.000752
ORF1ab/nsp3579A579VgCcgTc11B.1.214.20.0006
ORF1ab/nsp3579A579VgCcgTc11B.1.2400.000216
ORF1ab/nsp3579A579VgCcgTc11B.1.2650.001271
ORF1ab/nsp3579A579VgCcgTc11B.1.3240.001605
ORF1ab/nsp3579A579VgCcgTc11B.1.3400.004292
ORF1ab/nsp3579A579VgCcgTc11B.1.3490.000715
ORF1ab/nsp3579A579VgCcgTc11B.1.36.170.000494
ORF1ab/nsp3579A579VgCcgTc11B.1.36.390.002217
ORF1ab/nsp3579A579VgCcgTc11B.1.3620.001541
ORF1ab/nsp3579A579VgCcgTc11B.1.3690.000285
ORF1ab/nsp3579A579VgCcgTc11B.1.3820.008929
ORF1ab/nsp3579A579VgCcgTc11B.1.4040.001302
ORF1ab/nsp3579A579VgCcgTc11B.1.4250.002994
ORF1ab/nsp3579A579VgCcgTc11B.1.4260.001009
ORF1ab/nsp3579A579VgCcgTc11B.1.4560.003268
ORF1ab/nsp3579A579VgCcgTc11B.1.4690.00361
ORF1ab/nsp3579A579VgCcgTc11B.1.4700.001404
ORF1ab/nsp3579A579VgCcgTc11B.1.5090.000866
ORF1ab/nsp3579A579VgCcgTc11B.1.5430.01
ORF1ab/nsp3579A579VgCcgTc11B.1.5640.000426
ORF1ab/nsp3579A579VgCcgTc11B.1.5650.00081
ORF1ab/nsp3579A579VgCcgTc11B.1.5800.004065
ORF1ab/nsp3579A579VgCcgTc11B.1.5870.001898
ORF1ab/nsp3579A579VgCcgTc11B.1.5880.00091
ORF1ab/nsp3579A579VgCcgTc11B.1.5950.000261
ORF1ab/nsp3579A579VgCcgTc11B.1.5990.00365
ORF1ab/nsp3579A579VgCcgTc11B.1.6000.005848
ORF1ab/nsp3579A579VgCcgTc11B.1.6230.000536
ORF1ab/nsp3579A579VgCcgTc11B.310.003731
ORF1ab/nsp3579A579VgCcgTc11B.390.002331
ORF1ab/nsp3579A579VgCcgTc11B.40.002208
ORF1ab/nsp3579A579VgCcgTc11C.370.000116
ORF1ab/nsp3579A579VgCcgTc11N.50.001767
ORF1ab/nsp3579A579VgCcgTc11P.1.100.000269
ORF1ab/nsp3579A579VgCcgTc11P.1.170.000162
ORF1ab/nsp3579A579VgCcgTc11P.20.000187
ORF1ab/nsp3579A579VgCcgTc11P.50.013699