CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A54del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp354A54del1A872del1delGcc-cc430.752879-2881
ORF1ab/nsp354A54del1A872del1delgcCgc-410.252879-2881

Details of the mutation A54del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp354A54del1Gcc-cc34All0.000001
ORF1ab/nsp354A54del1gcCgc-14All0
ORF1ab/nsp354A54del1Gcc-cc22B.1.20.000018
ORF1ab/nsp354A54del1Gcc-cc11B.1.1.3780.007299
ORF1ab/nsp354A54del1gcCgc-11B.1.617.20.000004