CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A496A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3496A496AA1314AsyngcGgcT471141590.8828274205-4207
ORF1ab/nsp3496A496AA1314AsyngcGgcA47114550.09658254205-4207
ORF1ab/nsp3496A496AA1314AsyngcGgcC4711970.02059014205-4207

Details of the mutation A496A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3496A496AgcGgcT41594711All0.000795
ORF1ab/nsp3496A496AgcGgcA4554711All0.000087
ORF1ab/nsp3496A496AgcGgcC974711All0.000019
ORF1ab/nsp3496A496AgcGgcT708821B.1.1.70.000634
ORF1ab/nsp3496A496AgcGgcA107821B.1.1.70.000096
ORF1ab/nsp3496A496AgcGgcC6821B.1.1.70.000005
ORF1ab/nsp3496A496AgcGgcT618625AY.40.000962
ORF1ab/nsp3496A496AgcGgcA6625AY.40.000009
ORF1ab/nsp3496A496AgcGgcC1625AY.40.000002
ORF1ab/nsp3496A496AgcGgcT361390B.1.617.20.001359
ORF1ab/nsp3496A496AgcGgcA24390B.1.617.20.00009
ORF1ab/nsp3496A496AgcGgcC5390B.1.617.20.000019
ORF1ab/nsp3496A496AgcGgcT229233AY.430.001015
ORF1ab/nsp3496A496AgcGgcA2233AY.430.000009
ORF1ab/nsp3496A496AgcGgcC2233AY.430.000009
ORF1ab/nsp3496A496AgcGgcT156157AY.420.006276
ORF1ab/nsp3496A496AgcGgcC1157AY.420.00004
ORF1ab/nsp3496A496AgcGgcT150150B.1.1.3040.421348
ORF1ab/nsp3496A496AgcGgcT136140B.1.4290.0032
ORF1ab/nsp3496A496AgcGgcA4140B.1.4290.000094
ORF1ab/nsp3496A496AgcGgcT134134B.1.1.2430.546939
ORF1ab/nsp3496A496AgcGgcT75111AY.30.000746
ORF1ab/nsp3496A496AgcGgcA22111AY.30.000219
ORF1ab/nsp3496A496AgcGgcC14111AY.30.000139
ORF1ab/nsp3496A496AgcGgcT111111B.1.177.50.137888
ORF1ab/nsp3496A496AgcGgcT85105B.1.20.000748
ORF1ab/nsp3496A496AgcGgcA18105B.1.20.000158
ORF1ab/nsp3496A496AgcGgcC2105B.1.20.000018
ORF1ab/nsp3496A496AgcGgcT8087AY.1020.002121
ORF1ab/nsp3496A496AgcGgcA787AY.1020.000186
ORF1ab/nsp3496A496AgcGgcT6187B.10.000559
ORF1ab/nsp3496A496AgcGgcA2687B.10.000238
ORF1ab/nsp3496A496AgcGgcT6186AY.440.000371
ORF1ab/nsp3496A496AgcGgcA2486AY.440.000146
ORF1ab/nsp3496A496AgcGgcC186AY.440.000006
ORF1ab/nsp3496A496AgcGgcT5481AY.1030.000335
ORF1ab/nsp3496A496AgcGgcA2081AY.1030.000124
ORF1ab/nsp3496A496AgcGgcC781AY.1030.000043
ORF1ab/nsp3496A496AgcGgcT7178AY.1190.002507
ORF1ab/nsp3496A496AgcGgcA778AY.1190.000247
ORF1ab/nsp3496A496AgcGgcT7175AY.250.000427
ORF1ab/nsp3496A496AgcGgcA375AY.250.000018
ORF1ab/nsp3496A496AgcGgcC175AY.250.000006
ORF1ab/nsp3496A496AgcGgcT5555AY.730.036593
ORF1ab/nsp3496A496AgcGgcT5252AY.46.40.008554
ORF1ab/nsp3496A496AgcGgcT5252AY.980.004108
ORF1ab/nsp3496A496AgcGgcT4552P.10.000709
ORF1ab/nsp3496A496AgcGgcA752P.10.00011
ORF1ab/nsp3496A496AgcGgcT3140B.1.1770.000408
ORF1ab/nsp3496A496AgcGgcA540B.1.1770.000066
ORF1ab/nsp3496A496AgcGgcC440B.1.1770.000053
ORF1ab/nsp3496A496AgcGgcT3232AY.450.003894
ORF1ab/nsp3496A496AgcGgcA2531B.1.177.570.007024
ORF1ab/nsp3496A496AgcGgcT631B.1.177.570.001686
ORF1ab/nsp3496A496AgcGgcT2929AY.1140.006702
ORF1ab/nsp3496A496AgcGgcT2828B.1.1.131
ORF1ab/nsp3496A496AgcGgcT2426AY.200.000933
ORF1ab/nsp3496A496AgcGgcA126AY.200.000039
ORF1ab/nsp3496A496AgcGgcC126AY.200.000039
ORF1ab/nsp3496A496AgcGgcT2525AY.360.003705
ORF1ab/nsp3496A496AgcGgcT2525B.1.36.220.030193
ORF1ab/nsp3496A496AgcGgcT1823B.1.10.000327
ORF1ab/nsp3496A496AgcGgcA423B.1.10.000073
ORF1ab/nsp3496A496AgcGgcC123B.1.10.000018
ORF1ab/nsp3496A496AgcGgcC2022B.1.5960.001743
ORF1ab/nsp3496A496AgcGgcT222B.1.5960.000174
ORF1ab/nsp3496A496AgcGgcT1221AY.390.000297
ORF1ab/nsp3496A496AgcGgcA821AY.390.000198
ORF1ab/nsp3496A496AgcGgcC121AY.390.000025
ORF1ab/nsp3496A496AgcGgcT2121B.1.177.810.003976
ORF1ab/nsp3496A496AgcGgcT1519AY.98.10.000726
ORF1ab/nsp3496A496AgcGgcA419AY.98.10.000194
ORF1ab/nsp3496A496AgcGgcT1518B.1.3510.000446
ORF1ab/nsp3496A496AgcGgcA318B.1.3510.000089
ORF1ab/nsp3496A496AgcGgcT1818B.1.5260.000423
ORF1ab/nsp3496A496AgcGgcT1616AY.290.000252
ORF1ab/nsp3496A496AgcGgcT1216B.1.360.001751
ORF1ab/nsp3496A496AgcGgcA416B.1.360.000584
ORF1ab/nsp3496A496AgcGgcT1314B.1.2430.000905
ORF1ab/nsp3496A496AgcGgcC114B.1.2430.00007
ORF1ab/nsp3496A496AgcGgcT1313AY.340.001261
ORF1ab/nsp3496A496AgcGgcT1212AY.50.000248
ORF1ab/nsp3496A496AgcGgcA1010AY.270.000647
ORF1ab/nsp3496A496AgcGgcT1010AY.46.20.006353
ORF1ab/nsp3496A496AgcGgcT510AY.610.000524
ORF1ab/nsp3496A496AgcGgcC310AY.610.000314
ORF1ab/nsp3496A496AgcGgcA210AY.610.00021
ORF1ab/nsp3496A496AgcGgcT1010B.1.1.3720.006887
ORF1ab/nsp3496A496AgcGgcT1010B.1.3690.002852
ORF1ab/nsp3496A496AgcGgcT710B.1.4270.000353
ORF1ab/nsp3496A496AgcGgcA310B.1.4270.000151
ORF1ab/nsp3496A496AgcGgcT99A.2.5.10.043269
ORF1ab/nsp3496A496AgcGgcT99AY.1180.000564
ORF1ab/nsp3496A496AgcGgcT99AY.140.000792
ORF1ab/nsp3496A496AgcGgcT89AY.330.000534
ORF1ab/nsp3496A496AgcGgcC19AY.330.000067
ORF1ab/nsp3496A496AgcGgcA99B.1.621.10.004552
ORF1ab/nsp3496A496AgcGgcT68AY.230.000418
ORF1ab/nsp3496A496AgcGgcA18AY.230.00007
ORF1ab/nsp3496A496AgcGgcC18AY.230.00007
ORF1ab/nsp3496A496AgcGgcT58AY.260.000142
ORF1ab/nsp3496A496AgcGgcA28AY.260.000057
ORF1ab/nsp3496A496AgcGgcC18AY.260.000028
ORF1ab/nsp3496A496AgcGgcC68B.1.1.3060.00263
ORF1ab/nsp3496A496AgcGgcT28B.1.1.3060.000877
ORF1ab/nsp3496A496AgcGgcT68B.1.1.5190.000238
ORF1ab/nsp3496A496AgcGgcA28B.1.1.5190.000079
ORF1ab/nsp3496A496AgcGgcT88B.1.4280.008163
ORF1ab/nsp3496A496AgcGgcT77AY.1170.000592
ORF1ab/nsp3496A496AgcGgcT77B.1.177.320.009447
ORF1ab/nsp3496A496AgcGgcT77B.1.6280.002467
ORF1ab/nsp3496A496AgcGgcT77C.370.000812
ORF1ab/nsp3496A496AgcGgcT66AY.4.20.00013
ORF1ab/nsp3496A496AgcGgcT56AY.460.00052
ORF1ab/nsp3496A496AgcGgcA16AY.460.000104
ORF1ab/nsp3496A496AgcGgcT66AY.60.000247
ORF1ab/nsp3496A496AgcGgcT66AY.9.10.000502
ORF1ab/nsp3496A496AgcGgcT66AY.9.20.00022
ORF1ab/nsp3496A496AgcGgcT66B.1.1.4340.002091
ORF1ab/nsp3496A496AgcGgcA66B.1.2340.000792
ORF1ab/nsp3496A496AgcGgcT66B.1.2580.000399
ORF1ab/nsp3496A496AgcGgcT66P.1.170.000971
ORF1ab/nsp3496A496AgcGgcT66P.20.00112
ORF1ab/nsp3496A496AgcGgcT35AY.1200.000112
ORF1ab/nsp3496A496AgcGgcA25AY.1200.000074
ORF1ab/nsp3496A496AgcGgcT35AY.470.000093
ORF1ab/nsp3496A496AgcGgcA25AY.470.000062
ORF1ab/nsp3496A496AgcGgcT55AY.530.001438
ORF1ab/nsp3496A496AgcGgcT35AY.750.000168
ORF1ab/nsp3496A496AgcGgcA25AY.750.000112
ORF1ab/nsp3496A496AgcGgcA45B0.000511
ORF1ab/nsp3496A496AgcGgcT15B0.000128
ORF1ab/nsp3496A496AgcGgcT55B.1.1.2220.00102
ORF1ab/nsp3496A496AgcGgcA35B.1.1600.000094
ORF1ab/nsp3496A496AgcGgcT15B.1.1600.000031
ORF1ab/nsp3496A496AgcGgcC15B.1.1600.000031
ORF1ab/nsp3496A496AgcGgcT55B.1.2410.004058
ORF1ab/nsp3496A496AgcGgcT55P.1.140.000239
ORF1ab/nsp3496A496AgcGgcT34A.20.001985
ORF1ab/nsp3496A496AgcGgcC14A.20.000662
ORF1ab/nsp3496A496AgcGgcC34AY.1000.000138
ORF1ab/nsp3496A496AgcGgcT14AY.1000.000046
ORF1ab/nsp3496A496AgcGgcC44AY.1010.001962
ORF1ab/nsp3496A496AgcGgcT44AY.29.10.000882
ORF1ab/nsp3496A496AgcGgcT44AY.4.2.10.000596
ORF1ab/nsp3496A496AgcGgcT44AY.5.40.001107
ORF1ab/nsp3496A496AgcGgcC24AY.550.001835
ORF1ab/nsp3496A496AgcGgcA14AY.550.000917
ORF1ab/nsp3496A496AgcGgcT14AY.550.000917
ORF1ab/nsp3496A496AgcGgcT34AY.910.002191
ORF1ab/nsp3496A496AgcGgcA14AY.910.00073
ORF1ab/nsp3496A496AgcGgcT34B.1.1.10.00098
ORF1ab/nsp3496A496AgcGgcA14B.1.1.10.000327
ORF1ab/nsp3496A496AgcGgcT34B.1.1.2140.000166
ORF1ab/nsp3496A496AgcGgcA14B.1.1.2140.000055
ORF1ab/nsp3496A496AgcGgcT44B.1.1.280.001245
ORF1ab/nsp3496A496AgcGgcT44B.1.1.5260.014184
ORF1ab/nsp3496A496AgcGgcT44B.1.440.033333
ORF1ab/nsp3496A496AgcGgcA44D.20.0003
ORF1ab/nsp3496A496AgcGgcA330.166667
ORF1ab/nsp3496A496AgcGgcT33AY.1040.005952
ORF1ab/nsp3496A496AgcGgcT33AY.1110.000549
ORF1ab/nsp3496A496AgcGgcT33AY.1130.000427
ORF1ab/nsp3496A496AgcGgcT33AY.1210.000406
ORF1ab/nsp3496A496AgcGgcT23AY.3.10.000171
ORF1ab/nsp3496A496AgcGgcC13AY.3.10.000085
ORF1ab/nsp3496A496AgcGgcT33AY.39.10.000119
ORF1ab/nsp3496A496AgcGgcT33AY.4.50.000322
ORF1ab/nsp3496A496AgcGgcT23AY.690.000373
ORF1ab/nsp3496A496AgcGgcA13AY.690.000187
ORF1ab/nsp3496A496AgcGgcT33AY.75.10.000541
ORF1ab/nsp3496A496AgcGgcT23AY.900.001369
ORF1ab/nsp3496A496AgcGgcA13AY.900.000684
ORF1ab/nsp3496A496AgcGgcT33AY.99.20.000276
ORF1ab/nsp3496A496AgcGgcA23B.1.1.2910.001485
ORF1ab/nsp3496A496AgcGgcT13B.1.1.2910.000742
ORF1ab/nsp3496A496AgcGgcT33B.1.1.3150.025424
ORF1ab/nsp3496A496AgcGgcT33B.1.1280.001906
ORF1ab/nsp3496A496AgcGgcA23B.1.177.210.000153
ORF1ab/nsp3496A496AgcGgcT13B.1.177.210.000076
ORF1ab/nsp3496A496AgcGgcT23B.1.177.730.001133
ORF1ab/nsp3496A496AgcGgcC13B.1.177.730.000566
ORF1ab/nsp3496A496AgcGgcT33B.1.220.003953
ORF1ab/nsp3496A496AgcGgcA23B.1.2210.000142
ORF1ab/nsp3496A496AgcGgcT13B.1.2210.000071
ORF1ab/nsp3496A496AgcGgcT33B.1.416.10.004687
ORF1ab/nsp3496A496AgcGgcT23B.1.438.10.000215
ORF1ab/nsp3496A496AgcGgcC13B.1.438.10.000107
ORF1ab/nsp3496A496AgcGgcT33B.1.5760.00272
ORF1ab/nsp3496A496AgcGgcT33B.1.780.025641
ORF1ab/nsp3496A496AgcGgcT33R.10.00027
ORF1ab/nsp3496A496AgcGgcT22A.23.10.001408
ORF1ab/nsp3496A496AgcGgcT22A.280.005291
ORF1ab/nsp3496A496AgcGgcA12AY.1060.000335
ORF1ab/nsp3496A496AgcGgcT12AY.1060.000335
ORF1ab/nsp3496A496AgcGgcT22AY.160.000759
ORF1ab/nsp3496A496AgcGgcT12AY.320.000532
ORF1ab/nsp3496A496AgcGgcA12AY.320.000532
ORF1ab/nsp3496A496AgcGgcT22AY.34.10.00102
ORF1ab/nsp3496A496AgcGgcT12AY.46.60.000072
ORF1ab/nsp3496A496AgcGgcA12AY.46.60.000072
ORF1ab/nsp3496A496AgcGgcA22AY.5.30.000675
ORF1ab/nsp3496A496AgcGgcT22AY.640.00119
ORF1ab/nsp3496A496AgcGgcC12AY.650.000533
ORF1ab/nsp3496A496AgcGgcT12AY.650.000533
ORF1ab/nsp3496A496AgcGgcT12AY.680.000274
ORF1ab/nsp3496A496AgcGgcC12AY.680.000274
ORF1ab/nsp3496A496AgcGgcT22AY.7.20.001119
ORF1ab/nsp3496A496AgcGgcT22AY.780.003082
ORF1ab/nsp3496A496AgcGgcT22AY.90.000135
ORF1ab/nsp3496A496AgcGgcT22B.1.1.1170.019417
ORF1ab/nsp3496A496AgcGgcT22B.1.1.1280.014184
ORF1ab/nsp3496A496AgcGgcT22B.1.1.1890.003026
ORF1ab/nsp3496A496AgcGgcT22B.1.1.250.001137
ORF1ab/nsp3496A496AgcGgcA22B.1.1.3480.001592
ORF1ab/nsp3496A496AgcGgcT22B.1.1.3690.000892
ORF1ab/nsp3496A496AgcGgcT22B.1.177.440.001038
ORF1ab/nsp3496A496AgcGgcT22B.1.177.620.002384
ORF1ab/nsp3496A496AgcGgcA22B.1.177.860.000367
ORF1ab/nsp3496A496AgcGgcT22B.1.2140.007326
ORF1ab/nsp3496A496AgcGgcT22B.1.2320.001075
ORF1ab/nsp3496A496AgcGgcT22B.1.258.40.006897
ORF1ab/nsp3496A496AgcGgcA22B.1.2730.025974
ORF1ab/nsp3496A496AgcGgcT22B.1.36.290.001035
ORF1ab/nsp3496A496AgcGgcT22B.1.4660.046512
ORF1ab/nsp3496A496AgcGgcA22B.1.5050.008772
ORF1ab/nsp3496A496AgcGgcA12B.1.5090.000866
ORF1ab/nsp3496A496AgcGgcT12B.1.5090.000866
ORF1ab/nsp3496A496AgcGgcA22B.1.5370.04
ORF1ab/nsp3496A496AgcGgcT22B.1.5460.007407
ORF1ab/nsp3496A496AgcGgcC12B.1.6090.000479
ORF1ab/nsp3496A496AgcGgcT12B.1.6090.000479
ORF1ab/nsp3496A496AgcGgcT22B.1.6210.000177
ORF1ab/nsp3496A496AgcGgcA12B.1.6370.000073
ORF1ab/nsp3496A496AgcGgcT12B.1.6370.000073
ORF1ab/nsp3496A496AgcGgcT22B.1.80.003945
ORF1ab/nsp3496A496AgcGgcA22B.30.001661
ORF1ab/nsp3496A496AgcGgcA22C.300.003454
ORF1ab/nsp3496A496AgcGgcT22N.50.003534
ORF1ab/nsp3496A496AgcGgcT22P.1.20.002312
ORF1ab/nsp3496A496AgcGgcT12P.1.70.000319
ORF1ab/nsp3496A496AgcGgcA12P.1.70.000319
ORF1ab/nsp3496A496AgcGgcA11A0.000387
ORF1ab/nsp3496A496AgcGgcA11A.2.5.20.001572
ORF1ab/nsp3496A496AgcGgcT11AU.30.00211
ORF1ab/nsp3496A496AgcGgcT11AY.100.00053
ORF1ab/nsp3496A496AgcGgcT11AY.1050.000643
ORF1ab/nsp3496A496AgcGgcA11AY.1070.000466
ORF1ab/nsp3496A496AgcGgcT11AY.120.000316
ORF1ab/nsp3496A496AgcGgcT11AY.120.10.000321
ORF1ab/nsp3496A496AgcGgcT11AY.16.10.00047
ORF1ab/nsp3496A496AgcGgcT11AY.190.00114
ORF1ab/nsp3496A496AgcGgcT11AY.210.001898
ORF1ab/nsp3496A496AgcGgcT11AY.240.000431
ORF1ab/nsp3496A496AgcGgcA11AY.370.000316
ORF1ab/nsp3496A496AgcGgcT11AY.4.40.000409
ORF1ab/nsp3496A496AgcGgcA11AY.400.000964
ORF1ab/nsp3496A496AgcGgcT11AY.410.000294
ORF1ab/nsp3496A496AgcGgcA11AY.46.30.000934
ORF1ab/nsp3496A496AgcGgcT11AY.620.000436
ORF1ab/nsp3496A496AgcGgcT11AY.7.10.000113
ORF1ab/nsp3496A496AgcGgcT11AY.710.000475
ORF1ab/nsp3496A496AgcGgcA11AY.770.001127
ORF1ab/nsp3496A496AgcGgcA11AY.840.000437
ORF1ab/nsp3496A496AgcGgcT11AY.920.000287
ORF1ab/nsp3496A496AgcGgcT11AY.930.000273
ORF1ab/nsp3496A496AgcGgcT11AY.940.000443
ORF1ab/nsp3496A496AgcGgcT11AY.970.001701
ORF1ab/nsp3496A496AgcGgcA11B.1.1.1480.008772
ORF1ab/nsp3496A496AgcGgcA11B.1.1.1640.005155
ORF1ab/nsp3496A496AgcGgcT11B.1.1.1700.001247
ORF1ab/nsp3496A496AgcGgcT11B.1.1.1920.002309
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2160.00089
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2410.00207
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2440.015385
ORF1ab/nsp3496A496AgcGgcT11B.1.1.2840.000107
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3090.005848
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3110.000358
ORF1ab/nsp3496A496AgcGgcA11B.1.1.3260.001761
ORF1ab/nsp3496A496AgcGgcA11B.1.1.330.000421
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3500.04
ORF1ab/nsp3496A496AgcGgcT11B.1.1.3980.003226
ORF1ab/nsp3496A496AgcGgcT11B.1.1.4090.002833
ORF1ab/nsp3496A496AgcGgcT11B.1.1.4160.000905
ORF1ab/nsp3496A496AgcGgcT11B.1.1.4640.001473
ORF1ab/nsp3496A496AgcGgcA11B.1.1.470.005348
ORF1ab/nsp3496A496AgcGgcA11B.1.1.4860.001577
ORF1ab/nsp3496A496AgcGgcA11B.1.1.610.008772
ORF1ab/nsp3496A496AgcGgcT11B.1.1570.002985
ORF1ab/nsp3496A496AgcGgcA11B.1.160.70.002079
ORF1ab/nsp3496A496AgcGgcT11B.1.177.180.00116
ORF1ab/nsp3496A496AgcGgcT11B.1.177.230.003236
ORF1ab/nsp3496A496AgcGgcT11B.1.177.30.007634
ORF1ab/nsp3496A496AgcGgcA11B.1.177.330.001645
ORF1ab/nsp3496A496AgcGgcA11B.1.177.40.000211
ORF1ab/nsp3496A496AgcGgcA11B.1.177.690.001484
ORF1ab/nsp3496A496AgcGgcT11B.1.177.90.001332
ORF1ab/nsp3496A496AgcGgcA11B.1.2060.000816
ORF1ab/nsp3496A496AgcGgcT11B.1.2400.000216
ORF1ab/nsp3496A496AgcGgcT11B.1.258.170.000104
ORF1ab/nsp3496A496AgcGgcA11B.1.258.70.001912
ORF1ab/nsp3496A496AgcGgcT11B.1.2600.003344
ORF1ab/nsp3496A496AgcGgcT11B.1.2650.001271
ORF1ab/nsp3496A496AgcGgcT11B.1.3490.000715
ORF1ab/nsp3496A496AgcGgcT11B.1.36.10.00114
ORF1ab/nsp3496A496AgcGgcT11B.1.36.170.000494
ORF1ab/nsp3496A496AgcGgcT11B.1.36.180.00042
ORF1ab/nsp3496A496AgcGgcA11B.1.36.360.000602
ORF1ab/nsp3496A496AgcGgcA11B.1.36.80.001
ORF1ab/nsp3496A496AgcGgcA11B.1.3960.000706
ORF1ab/nsp3496A496AgcGgcA11B.1.4000.000429
ORF1ab/nsp3496A496AgcGgcT11B.1.4090.000781
ORF1ab/nsp3496A496AgcGgcT11B.1.4160.001269
ORF1ab/nsp3496A496AgcGgcA11B.1.4530.003236
ORF1ab/nsp3496A496AgcGgcT11B.1.4980.020408
ORF1ab/nsp3496A496AgcGgcA11B.1.5250.000113
ORF1ab/nsp3496A496AgcGgcA11B.1.5720.025
ORF1ab/nsp3496A496AgcGgcA11B.1.5740.002151
ORF1ab/nsp3496A496AgcGgcA11B.1.5950.000261
ORF1ab/nsp3496A496AgcGgcA11B.1.6010.030303
ORF1ab/nsp3496A496AgcGgcT11B.1.617.10.000129
ORF1ab/nsp3496A496AgcGgcT11B.1.6190.000871
ORF1ab/nsp3496A496AgcGgcT11B.400.000364
ORF1ab/nsp3496A496AgcGgcT11B.60.00091
ORF1ab/nsp3496A496AgcGgcA11C.360.000911
ORF1ab/nsp3496A496AgcGgcT11C.36.30.000567
ORF1ab/nsp3496A496AgcGgcA11P.1.100.000269
ORF1ab/nsp3496A496AgcGgcA11P.1.120.000484
ORF1ab/nsp3496A496AgcGgcT11P.1.150.000232
ORF1ab/nsp3496A496AgcGgcT11P.1.160.000374
ORF1ab/nsp3496A496AgcGgcT11Q.10.000126
ORF1ab/nsp3496A496AgcGgcT11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.