CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A488V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3488A488VA1306VnonsyngCtgTt1721710.9941864181-4183
ORF1ab/nsp3488A488VA1306VnonsyngCTgTC17210.005813954181-4183

Details of the mutation A488V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3488A488VgCtgTt171172All0.000033
ORF1ab/nsp3488A488VgCTgTC1172All0
ORF1ab/nsp3488A488VgCtgTt5959B.1.1.70.000053
ORF1ab/nsp3488A488VgCtgTt2929B.1.20.000255
ORF1ab/nsp3488A488VgCtgTt77B.1.2340.000924
ORF1ab/nsp3488A488VgCtgTt66B.10.000055
ORF1ab/nsp3488A488VgCtgTt66B.1.617.20.000023
ORF1ab/nsp3488A488VgCtgTt55B.1.1770.000066
ORF1ab/nsp3488A488VgCtgTt55P.1.140.000239
ORF1ab/nsp3488A488VgCtgTt44B.1.5820.001963
ORF1ab/nsp3488A488VgCtgTt33AY.140.000264
ORF1ab/nsp3488A488VgCtgTt33B.1.1600.000094
ORF1ab/nsp3488A488VgCtgTt33B.1.177.600.000655
ORF1ab/nsp3488A488VgCtgTt33B.1.4110.011111
ORF1ab/nsp3488A488VgCtgTt33P.10.000047
ORF1ab/nsp3488A488VgCtgTt120.055556
ORF1ab/nsp3488A488VgCTgTC120.055556
ORF1ab/nsp3488A488VgCtgTt22AY.260.000057
ORF1ab/nsp3488A488VgCtgTt22B.1.177.810.000379
ORF1ab/nsp3488A488VgCtgTt22B.1.2390.002442
ORF1ab/nsp3488A488VgCtgTt22B.1.4290.000047
ORF1ab/nsp3488A488VgCtgTt22Q.80.00033
ORF1ab/nsp3488A488VgCtgTt11AY.350.000233
ORF1ab/nsp3488A488VgCtgTt11AY.390.000025
ORF1ab/nsp3488A488VgCtgTt11AY.700.000209
ORF1ab/nsp3488A488VgCtgTt11AY.750.000056
ORF1ab/nsp3488A488VgCtgTt11AY.75.10.00018
ORF1ab/nsp3488A488VgCtgTt11AY.90.000068
ORF1ab/nsp3488A488VgCtgTt11B.1.1.2160.00089
ORF1ab/nsp3488A488VgCtgTt11B.1.1.2410.00207
ORF1ab/nsp3488A488VgCtgTt11B.1.1.2770.000759
ORF1ab/nsp3488A488VgCtgTt11B.1.1.3480.000796
ORF1ab/nsp3488A488VgCtgTt11B.1.1.3510.002793
ORF1ab/nsp3488A488VgCtgTt11B.1.1.440.00241
ORF1ab/nsp3488A488VgCtgTt11B.1.1.5190.00004
ORF1ab/nsp3488A488VgCtgTt11B.1.177.730.000566
ORF1ab/nsp3488A488VgCtgTt11B.1.2580.000067
ORF1ab/nsp3488A488VgCtgTt11B.1.258.170.000104
ORF1ab/nsp3488A488VgCtgTt11B.1.3240.001605
ORF1ab/nsp3488A488VgCtgTt11B.1.3510.00003
ORF1ab/nsp3488A488VgCtgTt11B.1.3750.00082
ORF1ab/nsp3488A488VgCtgTt11B.1.5740.002151
ORF1ab/nsp3488A488VgCtgTt11B.1.5960.000087
ORF1ab/nsp3488A488VgCtgTt11P.1.130.000898
ORF1ab/nsp3488A488VgCtgTt11P.1.150.000232
ORF1ab/nsp3488A488VgCtgTt11Q.30.000145