CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A488T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3488A488TA1306TnonsynGctAct81281214181-4183

Details of the mutation A488T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3488A488TGctAct812812All0.000155
ORF1ab/nsp3488A488TGctAct626626B.1.1.70.00056
ORF1ab/nsp3488A488TGctAct5353B.10.000485
ORF1ab/nsp3488A488TGctAct2121B.1.160.90.151079
ORF1ab/nsp3488A488TGctAct1717B.1.4290.0004
ORF1ab/nsp3488A488TGctAct1010B.1.10.000181
ORF1ab/nsp3488A488TGctAct88B.1.360.001167
ORF1ab/nsp3488A488TGctAct77B.1.1.250.00398
ORF1ab/nsp3488A488TGctAct77P.1.160.002619
ORF1ab/nsp3488A488TGctAct66P.10.000095
ORF1ab/nsp3488A488TGctAct55B.1.1.2390.16129
ORF1ab/nsp3488A488TGctAct44Q.80.00066
ORF1ab/nsp3488A488TGctAct33AY.590.001589
ORF1ab/nsp3488A488TGctAct33B.1.20.000026
ORF1ab/nsp3488A488TGctAct33B.1.5770.002062
ORF1ab/nsp3488A488TGctAct22AY.9.20.000073
ORF1ab/nsp3488A488TGctAct22B.1.1.2010.04878
ORF1ab/nsp3488A488TGctAct22B.1.1.3170.000823
ORF1ab/nsp3488A488TGctAct22B.1.1770.000026
ORF1ab/nsp3488A488TGctAct22B.1.3200.002491
ORF1ab/nsp3488A488TGctAct22B.1.466.20.000782
ORF1ab/nsp3488A488TGctAct22B.1.4990.002101
ORF1ab/nsp3488A488TGctAct22B.1.5960.000174
ORF1ab/nsp3488A488TGctAct11A.2.20.001689
ORF1ab/nsp3488A488TGctAct11AE.80.000489
ORF1ab/nsp3488A488TGctAct11AY.260.000028
ORF1ab/nsp3488A488TGctAct11B.1.1.2140.000055
ORF1ab/nsp3488A488TGctAct11B.1.1.2220.000204
ORF1ab/nsp3488A488TGctAct11B.1.1.3330.001076
ORF1ab/nsp3488A488TGctAct11B.1.1.5190.00004
ORF1ab/nsp3488A488TGctAct11B.1.177.70.000165
ORF1ab/nsp3488A488TGctAct11B.1.177.810.000189
ORF1ab/nsp3488A488TGctAct11B.1.2320.000537
ORF1ab/nsp3488A488TGctAct11B.1.3110.000275
ORF1ab/nsp3488A488TGctAct11B.1.3510.00003
ORF1ab/nsp3488A488TGctAct11B.1.4160.001269
ORF1ab/nsp3488A488TGctAct11B.1.4270.00005
ORF1ab/nsp3488A488TGctAct11B.1.5250.000113
ORF1ab/nsp3488A488TGctAct11B.1.5880.00091
ORF1ab/nsp3488A488TGctAct11B.1.5950.000261
ORF1ab/nsp3488A488TGctAct11B.1.6090.000479
ORF1ab/nsp3488A488TGctAct11B.1.617.20.000004
ORF1ab/nsp3488A488TGctAct11B.1.6210.000089
ORF1ab/nsp3488A488TGctAct11B.60.00091
ORF1ab/nsp3488A488TGctAct11P.20.000187
ORF1ab/nsp3488A488TGctAct11Q.70.001111