CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A480del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3480A480del1A1298del1delgcTgc-15120.84157-4159
ORF1ab/nsp3480A480del1A1298del1delGct-ct1520.1333334157-4159
ORF1ab/nsp3480A480del1A1298del1delgCtg-t1510.06666674157-4159

Details of the mutation A480del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3480A480del1gcTgc-1215All0.000002
ORF1ab/nsp3480A480del1Gct-ct215All0
ORF1ab/nsp3480A480del1gCtg-t115All0
ORF1ab/nsp3480A480del1gcTgc-33B.10.000027
ORF1ab/nsp3480A480del1gcTgc-23B.1.20.000018
ORF1ab/nsp3480A480del1Gct-ct13B.1.20.000009
ORF1ab/nsp3480A480del1gcTgc-11A0.000387
ORF1ab/nsp3480A480del1gCtg-t11AY.160.00038
ORF1ab/nsp3480A480del1gcTgc-11AY.39.1.10.000725
ORF1ab/nsp3480A480del1gcTgc-11AY.440.000006
ORF1ab/nsp3480A480del1Gct-ct11AY.46.60.000072
ORF1ab/nsp3480A480del1gcTgc-11AY.610.000105
ORF1ab/nsp3480A480del1gcTgc-11B.1.3800.006623
ORF1ab/nsp3480A480del1gcTgc-11B.1.5260.000024
ORF1ab/nsp3480A480del1gcTgc-11D.20.000075