CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A465del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3465A465del1A1283del1delgCtg-t82800.975614112-4114
ORF1ab/nsp3465A465del1A1283del1delgcTgc-8220.02439024112-4114

Details of the mutation A465del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3465A465del1gCtg-t8082All0.000015
ORF1ab/nsp3465A465del1gcTgc-282All0
ORF1ab/nsp3465A465del1gCtg-t6666B.1.1.70.000059
ORF1ab/nsp3465A465del1gCtg-t33B.1.177.820.001432
ORF1ab/nsp3465A465del1gCtg-t33B.1.3510.000089
ORF1ab/nsp3465A465del1gCtg-t22AY.520.001629
ORF1ab/nsp3465A465del1gCtg-t22B.1.1600.000062
ORF1ab/nsp3465A465del1gCtg-t11B0.000128
ORF1ab/nsp3465A465del1gCtg-t11B.1.177.60.000977
ORF1ab/nsp3465A465del1gCtg-t11B.1.36.10.00114
ORF1ab/nsp3465A465del1gcTgc-11B.1.6090.000479
ORF1ab/nsp3465A465del1gcTgc-11Q.20.000613
ORF1ab/nsp3465A465del1gCtg-t11R.10.00009