CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A41del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp341A41del1A859del1delgCcg-c320.6666672840-2842
ORF1ab/nsp341A41del1A859del1delGCc-Ac310.3333332840-2842

Details of the mutation A41del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp341A41del1gCcg-c23All0
ORF1ab/nsp341A41del1GCc-Ac13All0
ORF1ab/nsp341A41del1GCc-Ac11AY.440.000006
ORF1ab/nsp341A41del1gCcg-c11B.1.177.730.000566
ORF1ab/nsp341A41del1gCcg-c11B.1.36.290.000517