CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A328S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3328A328SA1146SnonsynGcaTca1281230.9609383701-3703
ORF1ab/nsp3328A328SA1146SnonsynGcATcC12830.02343753701-3703
ORF1ab/nsp3328A328SA1146SnonsynGcATcT12820.0156253701-3703

Details of the mutation A328S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3328A328SGcaTca123128All0.000024
ORF1ab/nsp3328A328SGcATcC3128All0.000001
ORF1ab/nsp3328A328SGcATcT2128All0
ORF1ab/nsp3328A328SGcaTca3535B.1.6370.002558
ORF1ab/nsp3328A328SGcaTca2828B.1.617.20.000105
ORF1ab/nsp3328A328SGcaTca1414P.20.002613
ORF1ab/nsp3328A328SGcaTca1313AY.430.000058
ORF1ab/nsp3328A328SGcaTca55B.1.1.70.000004
ORF1ab/nsp3328A328SGcATcT240.111111
ORF1ab/nsp3328A328SGcATcC240.111111
ORF1ab/nsp3328A328SGcaTca44AY.440.000024
ORF1ab/nsp3328A328SGcaTca34B.10.000027
ORF1ab/nsp3328A328SGcATcC14B.10.000009
ORF1ab/nsp3328A328SGcaTca33AY.1030.000019
ORF1ab/nsp3328A328SGcaTca33B.1.6260.017143
ORF1ab/nsp3328A328SGcaTca22AY.200.000078
ORF1ab/nsp3328A328SGcaTca22B.1.20.000018
ORF1ab/nsp3328A328SGcaTca11AY.390.000025
ORF1ab/nsp3328A328SGcaTca11AY.40.000002
ORF1ab/nsp3328A328SGcaTca11AY.710.000475
ORF1ab/nsp3328A328SGcaTca11B.1.10.000018
ORF1ab/nsp3328A328SGcaTca11B.1.1770.000013
ORF1ab/nsp3328A328SGcaTca11B.1.177.100.000878
ORF1ab/nsp3328A328SGcaTca11B.1.177.350.000691
ORF1ab/nsp3328A328SGcaTca11B.1.2430.00007
ORF1ab/nsp3328A328SGcaTca11B.1.4280.00102
ORF1ab/nsp3328A328SGcaTca11B.1.5260.000024
ORF1ab/nsp3328A328SGcaTca11P.10.000016