CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1941T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31941A1941TA2759TnonsynGcaAca1409140918540-8542

Details of the mutation A1941T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31941A1941TGcaAca14091409All0.000269
ORF1ab/nsp31941A1941TGcaAca718718AY.580.651543
ORF1ab/nsp31941A1941TGcaAca198198B.1.617.20.000746
ORF1ab/nsp31941A1941TGcaAca7676AY.430.000337
ORF1ab/nsp31941A1941TGcaAca6969AY.4.50.007417
ORF1ab/nsp31941A1941TGcaAca5151B.1.10.000925
ORF1ab/nsp31941A1941TGcaAca4646B.1.1.70.000041
ORF1ab/nsp31941A1941TGcaAca3333AY.250.000198
ORF1ab/nsp31941A1941TGcaAca2727AY.40.000042
ORF1ab/nsp31941A1941TGcaAca1717AY.5.30.005735
ORF1ab/nsp31941A1941TGcaAca1111AY.9.20.000404
ORF1ab/nsp31941A1941TGcaAca1111B.1.4290.000259
ORF1ab/nsp31941A1941TGcaAca1010B.1.2580.000665
ORF1ab/nsp31941A1941TGcaAca99B.10.000082
ORF1ab/nsp31941A1941TGcaAca88AY.1030.00005
ORF1ab/nsp31941A1941TGcaAca88B.1.1600.00025
ORF1ab/nsp31941A1941TGcaAca88P.10.000126
ORF1ab/nsp31941A1941TGcaAca77AY.540.000667
ORF1ab/nsp31941A1941TGcaAca66AY.390.000148
ORF1ab/nsp31941A1941TGcaAca66AY.590.003178
ORF1ab/nsp31941A1941TGcaAca55AY.610.000524
ORF1ab/nsp31941A1941TGcaAca44AY.230.000279
ORF1ab/nsp31941A1941TGcaAca44AY.440.000024
ORF1ab/nsp31941A1941TGcaAca44B.1.1.3540.017544
ORF1ab/nsp31941A1941TGcaAca44B.1.177.240.005181
ORF1ab/nsp31941A1941TGcaAca44B.1.6370.000292
ORF1ab/nsp31941A1941TGcaAca33AY.200.000117
ORF1ab/nsp31941A1941TGcaAca33AY.350.000699
ORF1ab/nsp31941A1941TGcaAca33AY.39.10.000119
ORF1ab/nsp31941A1941TGcaAca33AY.50.000062
ORF1ab/nsp31941A1941TGcaAca33B.1.20.000026
ORF1ab/nsp31941A1941TGcaAca33B.1.5260.000071
ORF1ab/nsp31941A1941TGcaAca22AY.1000.000092
ORF1ab/nsp31941A1941TGcaAca22AY.1020.000053
ORF1ab/nsp31941A1941TGcaAca22AY.470.000062
ORF1ab/nsp31941A1941TGcaAca22AY.520.001629
ORF1ab/nsp31941A1941TGcaAca22B.1.1.250.001137
ORF1ab/nsp31941A1941TGcaAca22B.1.2210.000142
ORF1ab/nsp31941A1941TGcaAca110.055556
ORF1ab/nsp31941A1941TGcaAca11AY.1100.000113
ORF1ab/nsp31941A1941TGcaAca11AY.130.000161
ORF1ab/nsp31941A1941TGcaAca11AY.190.00114
ORF1ab/nsp31941A1941TGcaAca11AY.260.000028
ORF1ab/nsp31941A1941TGcaAca11AY.270.000065
ORF1ab/nsp31941A1941TGcaAca11AY.290.000016
ORF1ab/nsp31941A1941TGcaAca11AY.340.000097
ORF1ab/nsp31941A1941TGcaAca11AY.4.20.000022
ORF1ab/nsp31941A1941TGcaAca11AY.420.00004
ORF1ab/nsp31941A1941TGcaAca11AY.460.000104
ORF1ab/nsp31941A1941TGcaAca11AY.46.60.000072
ORF1ab/nsp31941A1941TGcaAca11AY.670.000464
ORF1ab/nsp31941A1941TGcaAca11AY.750.000056
ORF1ab/nsp31941A1941TGcaAca11AY.75.10.00018
ORF1ab/nsp31941A1941TGcaAca11AY.780.001541
ORF1ab/nsp31941A1941TGcaAca11AY.880.000884
ORF1ab/nsp31941A1941TGcaAca11AY.990.001049
ORF1ab/nsp31941A1941TGcaAca11B.1.1.1700.001247
ORF1ab/nsp31941A1941TGcaAca11B.1.1.2140.000055
ORF1ab/nsp31941A1941TGcaAca11B.1.1.3060.000438
ORF1ab/nsp31941A1941TGcaAca11B.1.1.4090.002833
ORF1ab/nsp31941A1941TGcaAca11B.1.1770.000013
ORF1ab/nsp31941A1941TGcaAca11B.1.177.100.000878
ORF1ab/nsp31941A1941TGcaAca11B.1.177.730.000566
ORF1ab/nsp31941A1941TGcaAca11B.1.2430.00007
ORF1ab/nsp31941A1941TGcaAca11B.1.3510.00003
ORF1ab/nsp31941A1941TGcaAca11B.1.3560.001727
ORF1ab/nsp31941A1941TGcaAca11B.1.360.000146
ORF1ab/nsp31941A1941TGcaAca11B.1.3670.000792
ORF1ab/nsp31941A1941TGcaAca11B.1.4990.00105
ORF1ab/nsp31941A1941TGcaAca11B.1.5250.000113
ORF1ab/nsp31941A1941TGcaAca11B.1.6190.000871
ORF1ab/nsp31941A1941TGcaAca11B.6.60.000889
ORF1ab/nsp31941A1941TGcaAca11P.1.140.000048