CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1941S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31941A1941SA2759SnonsynGcaTca878718540-8542

Details of the mutation A1941S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31941A1941SGcaTca8787All0.000017
ORF1ab/nsp31941A1941SGcaTca3333AY.40.000051
ORF1ab/nsp31941A1941SGcaTca99B.1.1.70.000008
ORF1ab/nsp31941A1941SGcaTca66AY.250.000036
ORF1ab/nsp31941A1941SGcaTca55AY.430.000022
ORF1ab/nsp31941A1941SGcaTca33AY.390.000074
ORF1ab/nsp31941A1941SGcaTca33AY.440.000018
ORF1ab/nsp31941A1941SGcaTca22AY.1020.000053
ORF1ab/nsp31941A1941SGcaTca22AY.420.00008
ORF1ab/nsp31941A1941SGcaTca22B.1.4290.000047
ORF1ab/nsp31941A1941SGcaTca22B.1.617.20.000008
ORF1ab/nsp31941A1941SGcaTca22D.20.00015
ORF1ab/nsp31941A1941SGcaTca22P.10.000032
ORF1ab/nsp31941A1941SGcaTca11AY.1030.000006
ORF1ab/nsp31941A1941SGcaTca11AY.290.000016
ORF1ab/nsp31941A1941SGcaTca11AY.3.10.000085
ORF1ab/nsp31941A1941SGcaTca11AY.370.000316
ORF1ab/nsp31941A1941SGcaTca11AY.46.40.000165
ORF1ab/nsp31941A1941SGcaTca11AY.550.000917
ORF1ab/nsp31941A1941SGcaTca11AY.610.000105
ORF1ab/nsp31941A1941SGcaTca11AY.9.20.000037
ORF1ab/nsp31941A1941SGcaTca11AY.99.20.000092
ORF1ab/nsp31941A1941SGcaTca11B.1.10.000018
ORF1ab/nsp31941A1941SGcaTca11B.1.1.3180.000302
ORF1ab/nsp31941A1941SGcaTca11B.1.1.5190.00004
ORF1ab/nsp31941A1941SGcaTca11B.1.160.150.00495
ORF1ab/nsp31941A1941SGcaTca11B.1.177.750.001041
ORF1ab/nsp31941A1941SGcaTca11B.1.4270.00005
ORF1ab/nsp31941A1941SGcaTca11B.1.4500.011364