CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1878V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31878A1878VA2696VnonsyngCggTg1029102918351-8353

Details of the mutation A1878V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31878A1878VgCggTg10291029All0.000197
ORF1ab/nsp31878A1878VgCggTg598598B.1.1.70.000535
ORF1ab/nsp31878A1878VgCggTg9292AY.1030.000571
ORF1ab/nsp31878A1878VgCggTg7171AY.40.000111
ORF1ab/nsp31878A1878VgCggTg3131C.370.003598
ORF1ab/nsp31878A1878VgCggTg2121B.10.000192
ORF1ab/nsp31878A1878VgCggTg1818AY.430.00008
ORF1ab/nsp31878A1878VgCggTg1414B.1.20.000123
ORF1ab/nsp31878A1878VgCggTg1313B.1.617.20.000049
ORF1ab/nsp31878A1878VgCggTg1212AY.250.000072
ORF1ab/nsp31878A1878VgCggTg88B.1.130.019002
ORF1ab/nsp31878A1878VgCggTg77B.1.1.4640.010309
ORF1ab/nsp31878A1878VgCggTg77B.1.1770.000092
ORF1ab/nsp31878A1878VgCggTg77P.10.00011
ORF1ab/nsp31878A1878VgCggTg66AY.30.00006
ORF1ab/nsp31878A1878VgCggTg66B.1.1.1870.053097
ORF1ab/nsp31878A1878VgCggTg66B.1.4290.000141
ORF1ab/nsp31878A1878VgCggTg55AY.46.50.000992
ORF1ab/nsp31878A1878VgCggTg55B.1.10.000091
ORF1ab/nsp31878A1878VgCggTg44AY.1130.00057
ORF1ab/nsp31878A1878VgCggTg44AY.200.000155
ORF1ab/nsp31878A1878VgCggTg44AY.230.000279
ORF1ab/nsp31878A1878VgCggTg44B.1.1600.000125
ORF1ab/nsp31878A1878VgCggTg44B.1.2430.000278
ORF1ab/nsp31878A1878VgCggTg33AY.1020.00008
ORF1ab/nsp31878A1878VgCggTg33AY.390.000074
ORF1ab/nsp31878A1878VgCggTg33AY.4.20.000065
ORF1ab/nsp31878A1878VgCggTg33AY.440.000018
ORF1ab/nsp31878A1878VgCggTg33B.1.1790.011278
ORF1ab/nsp31878A1878VgCggTg33B.1.6050.017857
ORF1ab/nsp31878A1878VgCggTg33B.1.617.10.000387
ORF1ab/nsp31878A1878VgCggTg33D.20.000225
ORF1ab/nsp31878A1878VgCggTg22AY.1180.000125
ORF1ab/nsp31878A1878VgCggTg22AY.140.000176
ORF1ab/nsp31878A1878VgCggTg22AY.420.00008
ORF1ab/nsp31878A1878VgCggTg22AY.98.10.000097
ORF1ab/nsp31878A1878VgCggTg22B.1.1.2220.000408
ORF1ab/nsp31878A1878VgCggTg22B.1.1.500.001358
ORF1ab/nsp31878A1878VgCggTg22B.1.1.5190.000079
ORF1ab/nsp31878A1878VgCggTg22B.1.177.460.001837
ORF1ab/nsp31878A1878VgCggTg22B.1.177.720.00678
ORF1ab/nsp31878A1878VgCggTg22B.1.2390.002442
ORF1ab/nsp31878A1878VgCggTg22B.1.4270.000101
ORF1ab/nsp31878A1878VgCggTg22B.1.4660.046512
ORF1ab/nsp31878A1878VgCggTg11A.10.000282
ORF1ab/nsp31878A1878VgCggTg11A.40.012821
ORF1ab/nsp31878A1878VgCggTg11AM.40.003571
ORF1ab/nsp31878A1878VgCggTg11AP.10.001502
ORF1ab/nsp31878A1878VgCggTg11AY.1060.000335
ORF1ab/nsp31878A1878VgCggTg11AY.1090.00074
ORF1ab/nsp31878A1878VgCggTg11AY.1190.000035
ORF1ab/nsp31878A1878VgCggTg11AY.290.000016
ORF1ab/nsp31878A1878VgCggTg11AY.39.10.00004
ORF1ab/nsp31878A1878VgCggTg11AY.400.000964
ORF1ab/nsp31878A1878VgCggTg11AY.460.000104
ORF1ab/nsp31878A1878VgCggTg11AY.46.60.000072
ORF1ab/nsp31878A1878VgCggTg11AY.480.000465
ORF1ab/nsp31878A1878VgCggTg11AY.50.000021
ORF1ab/nsp31878A1878VgCggTg11AY.570.000656
ORF1ab/nsp31878A1878VgCggTg11AY.60.000041
ORF1ab/nsp31878A1878VgCggTg11AY.740.000116
ORF1ab/nsp31878A1878VgCggTg11AY.750.000056
ORF1ab/nsp31878A1878VgCggTg11AY.790.001211
ORF1ab/nsp31878A1878VgCggTg11B.1.1.390.00051
ORF1ab/nsp31878A1878VgCggTg11B.1.1.700.000341
ORF1ab/nsp31878A1878VgCggTg11B.1.177.180.00116
ORF1ab/nsp31878A1878VgCggTg11B.1.177.860.000183
ORF1ab/nsp31878A1878VgCggTg11B.1.177.90.001332
ORF1ab/nsp31878A1878VgCggTg11B.1.2400.000216
ORF1ab/nsp31878A1878VgCggTg11B.1.3050.002151
ORF1ab/nsp31878A1878VgCggTg11B.1.3130.006579
ORF1ab/nsp31878A1878VgCggTg11B.1.360.000146
ORF1ab/nsp31878A1878VgCggTg11B.1.4730.019231
ORF1ab/nsp31878A1878VgCggTg11B.1.5250.000113
ORF1ab/nsp31878A1878VgCggTg11B.1.5820.000491
ORF1ab/nsp31878A1878VgCggTg11B.400.000364
ORF1ab/nsp31878A1878VgCggTg11N.40.004255
ORF1ab/nsp31878A1878VgCggTg11Q.10.000126