CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1739del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31739A1739del1A2557del1delgcGgc-760.8571437934-7936
ORF1ab/nsp31739A1739del1A2557del1delgCgg-g710.1428577934-7936

Details of the mutation A1739del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31739A1739del1gcGgc-67All0.000001
ORF1ab/nsp31739A1739del1gCgg-g17All0
ORF1ab/nsp31739A1739del1gcGgc-22B.1.1.70.000002
ORF1ab/nsp31739A1739del1gcGgc-11AY.1000.000046
ORF1ab/nsp31739A1739del1gCgg-g11AY.420.00004
ORF1ab/nsp31739A1739del1gcGgc-11B.10.000009
ORF1ab/nsp31739A1739del1gcGgc-11B.1.10.000018
ORF1ab/nsp31739A1739del1gcGgc-11B.1.360.000146