CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1739 | A1739A | A2557A | syn | gcG | gcT | 13793 | 12299 | 0.891684 | 7934-7936 |
ORF1ab/nsp3 | 1739 | A1739A | A2557A | syn | gcG | gcA | 13793 | 1114 | 0.0807656 | 7934-7936 |
ORF1ab/nsp3 | 1739 | A1739A | A2557A | syn | gcG | gcC | 13793 | 380 | 0.0275502 | 7934-7936 |
Details of the mutation A1739A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 12299 | 13793 | All | 0.002352 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1114 | 13793 | All | 0.000213 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 380 | 13793 | All | 0.000073 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2774 | 2848 | B.1.617.2 | 0.010445 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 49 | 2848 | B.1.617.2 | 0.000185 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 25 | 2848 | B.1.617.2 | 0.000094 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2797 | 2797 | AY.41 | 0.822163 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1437 | 1491 | AY.103 | 0.008922 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 44 | 1491 | AY.103 | 0.000273 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 10 | 1491 | AY.103 | 0.000062 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 650 | 1058 | B.1.1.7 | 0.000582 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 339 | 1058 | B.1.1.7 | 0.000303 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 69 | 1058 | B.1.1.7 | 0.000062 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 350 | 423 | AY.4 | 0.000545 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 40 | 423 | AY.4 | 0.000062 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 33 | 423 | AY.4 | 0.000051 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 370 | 374 | AY.42 | 0.014885 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 374 | AY.42 | 0.000121 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 374 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 194 | 341 | B.1.2 | 0.001708 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 141 | 341 | B.1.2 | 0.001242 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 6 | 341 | B.1.2 | 0.000053 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 339 | 340 | B.1.265 | 0.43075 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 340 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 271 | 293 | AY.43 | 0.001201 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 16 | 293 | AY.43 | 0.000071 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 6 | 293 | AY.43 | 0.000027 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 245 | 253 | P.1 | 0.00386 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 7 | 253 | P.1 | 0.00011 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 253 | P.1 | 0.000016 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 217 | 218 | AY.33 | 0.014491 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 218 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 169 | 180 | AY.102 | 0.004481 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 7 | 180 | AY.102 | 0.000186 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 4 | 180 | AY.102 | 0.000106 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 100 | 152 | AY.39 | 0.002471 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 36 | 152 | AY.39 | 0.00089 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 16 | 152 | AY.39 | 0.000395 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 149 | 149 | C.30.1 | 1 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 96 | 130 | B.1 | 0.000879 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 32 | 130 | B.1 | 0.000293 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 130 | B.1 | 0.000018 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 86 | 120 | AY.44 | 0.000523 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 28 | 120 | AY.44 | 0.00017 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 6 | 120 | AY.44 | 0.000037 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 114 | 119 | R.1 | 0.010261 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 5 | 119 | R.1 | 0.00045 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 74 | 112 | AY.25 | 0.000445 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 33 | 112 | AY.25 | 0.000198 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 5 | 112 | AY.25 | 0.00003 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 98 | 98 | B.1.1.420 | 0.098592 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 85 | 88 | AY.9.1 | 0.007117 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 88 | AY.9.1 | 0.000251 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 73 | 79 | AY.71 | 0.034679 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 6 | 79 | AY.71 | 0.00285 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 75 | 75 | B.1.423 | 0.765306 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 42 | 74 | B.1.1 | 0.000762 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 29 | 74 | B.1.1 | 0.000526 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 74 | B.1.1 | 0.000054 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 67 | 67 | B.1.36 | 0.009775 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 50 | 66 | AY.3 | 0.000497 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 13 | 66 | AY.3 | 0.000129 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 66 | AY.3 | 0.00003 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 66 | 66 | C.30 | 0.11399 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 42 | 64 | B.1.177 | 0.000553 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 22 | 64 | B.1.177 | 0.00029 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 62 | 62 | AY.14 | 0.005457 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 61 | 61 | AY.13 | 0.00982 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 55 | 55 | B.1.160 | 0.001715 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 40 | 41 | B.1.1.1 | 0.013068 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 41 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 39 | 40 | B.1.429 | 0.000918 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 40 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 38 | 39 | AY.46 | 0.003955 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 39 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 30 | 34 | B.1.351 | 0.000892 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 34 | B.1.351 | 0.000089 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 34 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 32 | 33 | B.1.1.222 | 0.006528 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 33 | B.1.1.222 | 0.000204 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 33 | 33 | B.1.612 | 0.087533 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 29 | 31 | AY.1 | 0.011476 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 31 | AY.1 | 0.000791 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 25 | 31 | AY.20 | 0.000972 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 4 | 31 | AY.20 | 0.000155 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 31 | AY.20 | 0.000078 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 29 | 29 | AY.120.1 | 0.00931 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 29 | 29 | AY.75.1 | 0.005229 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 28 | 29 | B.1.526 | 0.000658 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 29 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 27 | 27 | B.1.177.49 | 1 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 26 | 26 | AY.9.2 | 0.000955 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 17 | 24 | AY.23 | 0.001186 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 24 | AY.23 | 0.000349 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 24 | AY.23 | 0.000139 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 18 | 23 | AY.29 | 0.000284 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 4 | 23 | AY.29 | 0.000063 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 23 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 23 | 23 | AY.46.6 | 0.001661 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 20 | 22 | AY.3.1 | 0.001705 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 22 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 22 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 21 | 22 | B.1.1.519 | 0.000834 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 22 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 12 | 21 | B.1.221 | 0.000852 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 9 | 21 | B.1.221 | 0.000639 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 21 | 21 | B.1.595 | 0.00548 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 19 | 20 | AY.121 | 0.002571 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 20 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 15 | 20 | AY.26 | 0.000425 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 20 | AY.26 | 0.000085 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 20 | AY.26 | 0.000057 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 19 | 20 | AY.45 | 0.002312 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 20 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 20 | 20 | B.1.382 | 0.178571 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 19 | 19 | AE.8 | 0.009291 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 13 | 18 | AY.119 | 0.000459 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 18 | AY.119 | 0.000106 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 18 | AY.119 | 0.000071 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 18 | 18 | AY.5 | 0.000372 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 15 | 17 | AY.98.1 | 0.000726 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 17 | AY.98.1 | 0.000097 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 17 | 17 | B.1.1.89 | 0.10303 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 14 | 16 | AY.100 | 0.000644 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 16 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 12 | 16 | AY.47 | 0.000373 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 16 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 16 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 10 | 16 | AY.61 | 0.001048 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 6 | 16 | AY.61 | 0.000629 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 16 | 16 | B.1.258.14 | 0.015686 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 15 | 15 | B.1.1.33 | 0.006313 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 15 | 15 | B.1.369 | 0.004278 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 10 | 14 | AY.67 | 0.004643 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 4 | 14 | AY.67 | 0.001857 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 11 | 13 | AY.68 | 0.003011 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 13 | AY.68 | 0.000547 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 12 | 12 | P.1.1 | 0.003812 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 6 | 11 | AY.120 | 0.000223 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 5 | 11 | AY.120 | 0.000186 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 9 | 11 | AY.6 | 0.00037 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 11 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 11 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 10 | 11 | AY.98 | 0.00079 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 11 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 10 | 11 | B.1.617.1 | 0.00129 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 11 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 6 | 11 | B.1.637 | 0.000438 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 11 | B.1.637 | 0.000365 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 11 | 11 | C.37 | 0.001277 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 10 | 10 | B.1.406 | 0.060606 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 8 | 10 | P.2 | 0.001493 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 10 | P.2 | 0.000373 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 8 | 9 | AY.39.1 | 0.000317 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 9 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 6 | 9 | AY.99.2 | 0.000553 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 9 | AY.99.2 | 0.000276 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 8 | 9 | B.1.1.317 | 0.003294 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 9 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 9 | 9 | B.1.1.358 | 0.310345 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 9 | 9 | B.1.486 | 1 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 8 | 8 | AY.111 | 0.001465 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 8 | 8 | AY.34 | 0.000776 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 7 | 8 | B.1.427 | 0.000353 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 8 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 7 | 8 | B.1.596 | 0.00061 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 8 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 8 | P.1.14 | 0.000239 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 8 | P.1.14 | 0.000143 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 8 | 8 | Q.3 | 0.00116 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 7 | 7 | AY.5.4 | 0.001937 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 7 | 7 | AY.7.1 | 0.000789 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 6 | 7 | AY.75 | 0.000336 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 7 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 7 | 7 | B.1.243 | 0.000487 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 7 | 7 | B.1.36.29 | 0.003621 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 7 | 7 | B.1.609 | 0.003356 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 7 | B.1.621 | 0.000443 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 7 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 7 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 6 | AY.118 | 0.000313 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 6 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 4 | 6 | AY.2 | 0.001425 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 6 | AY.2 | 0.000712 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 5 | 6 | AY.38 | 0.002496 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 6 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 6 | AY.4.2 | 0.000087 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 6 | AY.4.2 | 0.000043 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 6 | 6 | B.1.177.52 | 0.010545 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 6 | 6 | B.1.232 | 0.003224 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 5 | 5 | 0.277778 | |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | A.3 | 0.010482 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | AY.113 | 0.000712 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | AY.22 | 0.01046 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 5 | AY.5.3 | 0.00135 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 5 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | AY.51 | 0.004545 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | AY.77 | 0.005637 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | AY.92 | 0.001436 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 5 | B.1.1.28 | 0.000934 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 5 | B.1.1.28 | 0.000622 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 3 | 5 | B.1.36.8 | 0.003 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 5 | B.1.36.8 | 0.002 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 5 | 5 | P.1.17 | 0.000809 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | AY.106 | 0.00134 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 4 | AY.36 | 0.000296 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 4 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 4 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | AY.62 | 0.001743 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 4 | AY.74 | 0.000347 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 4 | AY.74 | 0.000116 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | AZ.3 | 0.006079 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 4 | B.1.1.214 | 0.000166 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 4 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.1.231 | 0.012384 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 4 | B.1.1.298 | 0.001724 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 4 | B.1.1.298 | 0.001724 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 4 | B.1.1.39 | 0.001529 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 4 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.147 | 0.003023 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.177.31 | 0.045977 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.177.4 | 0.000844 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.222 | 0.006768 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.241 | 0.003247 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.258 | 0.000266 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | B.1.391 | 0.00451 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 3 | A.2 | 0.001985 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | A.27 | 0.004967 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 3 | AD.2 | 0.000438 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 3 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | AY.24 | 0.001293 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | AY.31 | 0.055556 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 3 | AY.35 | 0.000466 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 3 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | AY.95 | 0.002283 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 3 | B.1.1.25 | 0.001137 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 3 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.1.463 | 0.1875 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.110.3 | 0.002155 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.177.35 | 0.002073 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 3 | 3 | B.1.214.3 | 0.021429 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.320 | 0.003736 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.336 | 0.007317 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | A.2.5.2 | 0.001572 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | A.2.5.2 | 0.001572 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 2 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 2 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.258 | 0.006515 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 2 | B.1.1.288 | 0.003831 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.315 | 0.016949 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.368 | 0.006173 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.369 | 0.000892 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.424 | 0.090909 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.1.67 | 0.009132 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.131 | 0.017544 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.177.17 | 0.001642 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.22 | 0.002635 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.302 | 0.026667 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.399 | 0.003868 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | B.1.462 | 0.014493 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 2 | B.1.548 | 0.071429 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | C.1 | 0.004785 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | C.36 | 0.000911 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | C.36 | 0.000911 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | C.39 | 0.037736 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | N.4 | 0.008511 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | P.3 | 0.001595 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 2 | P.3 | 0.001595 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 2 | P.6 | 0.003145 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 2 | P.6 | 0.003145 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | Q.2 | 0.001227 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.172 | 0.018182 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.1.217 | 0.003636 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.219 | 0.005 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.226 | 0.005814 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.285 | 0.006536 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.177.26 | 0.006993 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.1.370 | 0.008 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.502 | 0.052632 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.603 | 0.010638 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | B.6.1 | 0.026316 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcA | 1 | 1 | C.8 | 0.004464 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | D.5 | 0.004975 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcC | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | S.1 | 0.00495 |
ORF1ab/nsp3 | 1739 | A1739A | gcG | gcT | 1 | 1 | Y.1 | 0.012821 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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