CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1736del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31736A1736del1A2554del1delgcAgc-22170.7727277925-7927
ORF1ab/nsp31736A1736del1A2554del1delGCATT-2220.09090917925-7927
ORF1ab/nsp31736A1736del1A2554del1delGca-ca2220.09090917925-7927
ORF1ab/nsp31736A1736del1A2554del1delGcATc-2210.04545457925-7927

Details of the mutation A1736del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31736A1736del1gcAgc-1722All0.000003
ORF1ab/nsp31736A1736del1Gca-ca222All0
ORF1ab/nsp31736A1736del1GCATT-222All0
ORF1ab/nsp31736A1736del1GcATc-122All0
ORF1ab/nsp31736A1736del1Gca-ca24AY.430.000009
ORF1ab/nsp31736A1736del1gcAgc-24AY.430.000009
ORF1ab/nsp31736A1736del1GCATT-220.111111
ORF1ab/nsp31736A1736del1gcAgc-22AU.10.002532
ORF1ab/nsp31736A1736del1gcAgc-22AY.440.000012
ORF1ab/nsp31736A1736del1gcAgc-11AY.1030.000006
ORF1ab/nsp31736A1736del1gcAgc-11AY.390.000025
ORF1ab/nsp31736A1736del1gcAgc-11AY.40.000002
ORF1ab/nsp31736A1736del1GcATc-11B0.000128
ORF1ab/nsp31736A1736del1gcAgc-11B.10.000009
ORF1ab/nsp31736A1736del1gcAgc-11B.1.10.000018
ORF1ab/nsp31736A1736del1gcAgc-11B.1.160.140.002119
ORF1ab/nsp31736A1736del1gcAgc-11B.1.160.200.008929
ORF1ab/nsp31736A1736del1gcAgc-11B.1.1770.000013
ORF1ab/nsp31736A1736del1gcAgc-11B.1.20.000009
ORF1ab/nsp31736A1736del1gcAgc-11B.1.466.20.000391
ORF1ab/nsp31736A1736del1gcAgc-11B.1.617.20.000004