CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1711T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31711A1711TA2529TnonsynGctAct2902880.9931037850-7852
ORF1ab/nsp31711A1711TA2529TnonsynGcTAcA29010.003448287850-7852
ORF1ab/nsp31711A1711TA2529TnonsynGcTAcC29010.003448287850-7852

Details of the mutation A1711T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31711A1711TGctAct288290All0.000055
ORF1ab/nsp31711A1711TGcTAcA1290All0
ORF1ab/nsp31711A1711TGcTAcC1290All0
ORF1ab/nsp31711A1711TGctAct5757B.1.1770.000751
ORF1ab/nsp31711A1711TGctAct4949B.1.1.70.000044
ORF1ab/nsp31711A1711TGctAct4949P.10.000772
ORF1ab/nsp31711A1711TGctAct2525B.1.617.20.000094
ORF1ab/nsp31711A1711TGctAct1212AY.330.000801
ORF1ab/nsp31711A1711TGctAct88AY.340.000776
ORF1ab/nsp31711A1711TGctAct77B.1.1.390.003568
ORF1ab/nsp31711A1711TGctAct77B.1.1.5190.000278
ORF1ab/nsp31711A1711TGctAct66B.10.000055
ORF1ab/nsp31711A1711TGctAct340.166667
ORF1ab/nsp31711A1711TGcTAcC140.055556
ORF1ab/nsp31711A1711TGctAct44AY.440.000024
ORF1ab/nsp31711A1711TGctAct44AY.540.000381
ORF1ab/nsp31711A1711TGctAct44B.1.36.90.012862
ORF1ab/nsp31711A1711TGctAct33AY.1020.00008
ORF1ab/nsp31711A1711TGctAct33AY.380.001498
ORF1ab/nsp31711A1711TGctAct33AY.50.000062
ORF1ab/nsp31711A1711TGctAct33AY.99.20.000276
ORF1ab/nsp31711A1711TGctAct23B.1.10.000036
ORF1ab/nsp31711A1711TGcTAcA13B.1.10.000018
ORF1ab/nsp31711A1711TGctAct33B.1.20.000026
ORF1ab/nsp31711A1711TGctAct22AY.1000.000092
ORF1ab/nsp31711A1711TGctAct22AY.110.002677
ORF1ab/nsp31711A1711TGctAct22AY.30.00002
ORF1ab/nsp31711A1711TGctAct22B.1.1600.000062
ORF1ab/nsp31711A1711TGctAct22D.20.00015
ORF1ab/nsp31711A1711TGctAct22P.1.10.000635
ORF1ab/nsp31711A1711TGctAct11A.10.000282
ORF1ab/nsp31711A1711TGctAct11AY.1030.000006
ORF1ab/nsp31711A1711TGctAct11AY.230.00007
ORF1ab/nsp31711A1711TGctAct11AY.250.000006
ORF1ab/nsp31711A1711TGctAct11AY.390.000025
ORF1ab/nsp31711A1711TGctAct11AY.430.000004
ORF1ab/nsp31711A1711TGctAct11AY.470.000031
ORF1ab/nsp31711A1711TGctAct11AY.75.10.00018
ORF1ab/nsp31711A1711TGctAct11AY.90.000068
ORF1ab/nsp31711A1711TGctAct11AY.980.000079
ORF1ab/nsp31711A1711TGctAct11B.1.1.3060.000438
ORF1ab/nsp31711A1711TGctAct11B.1.1.440.00241
ORF1ab/nsp31711A1711TGctAct11B.1.1.610.008772
ORF1ab/nsp31711A1711TGctAct11B.1.177.560.000668
ORF1ab/nsp31711A1711TGctAct11B.1.2210.000071
ORF1ab/nsp31711A1711TGctAct11B.1.3360.002439
ORF1ab/nsp31711A1711TGctAct11B.1.4270.00005
ORF1ab/nsp31711A1711TGctAct11B.1.4290.000024
ORF1ab/nsp31711A1711TGctAct11B.1.6370.000073
ORF1ab/nsp31711A1711TGctAct11B.1.810.021277
ORF1ab/nsp31711A1711TGctAct11C.10.002392
ORF1ab/nsp31711A1711TGctAct11C.36.30.000567
ORF1ab/nsp31711A1711TGctAct11P.1.120.000484
ORF1ab/nsp31711A1711TGctAct11Q.10.000126