CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1652V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31652A1652VA2470VnonsyngCggTg53490.9245287673-7675
ORF1ab/nsp31652A1652VA2470VnonsyngCGgTT5340.07547177673-7675

Details of the mutation A1652V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31652A1652VgCggTg4953All0.000009
ORF1ab/nsp31652A1652VgCGgTT453All0.000001
ORF1ab/nsp31652A1652VgCggTg1215B.1.1.70.000011
ORF1ab/nsp31652A1652VgCGgTT315B.1.1.70.000003
ORF1ab/nsp31652A1652VgCggTg77AY.590.003708
ORF1ab/nsp31652A1652VgCggTg55B.10.000046
ORF1ab/nsp31652A1652VgCggTg33B.1.10.000054
ORF1ab/nsp31652A1652VgCggTg220.111111
ORF1ab/nsp31652A1652VgCggTg22AY.670.000929
ORF1ab/nsp31652A1652VgCggTg12P.10.000016
ORF1ab/nsp31652A1652VgCGgTT12P.10.000016
ORF1ab/nsp31652A1652VgCggTg11AY.1180.000063
ORF1ab/nsp31652A1652VgCggTg11AY.30.00001
ORF1ab/nsp31652A1652VgCggTg11AY.710.000475
ORF1ab/nsp31652A1652VgCggTg11AY.940.000443
ORF1ab/nsp31652A1652VgCggTg11AY.950.000761
ORF1ab/nsp31652A1652VgCggTg11B.1.1.4090.002833
ORF1ab/nsp31652A1652VgCggTg11B.1.1600.000031
ORF1ab/nsp31652A1652VgCggTg11B.1.1770.000013
ORF1ab/nsp31652A1652VgCggTg11B.1.20.000009
ORF1ab/nsp31652A1652VgCggTg11B.1.2430.00007
ORF1ab/nsp31652A1652VgCggTg11B.1.3690.000285
ORF1ab/nsp31652A1652VgCggTg11B.1.3910.001127
ORF1ab/nsp31652A1652VgCggTg11B.1.3960.000706
ORF1ab/nsp31652A1652VgCggTg11B.1.5770.000687
ORF1ab/nsp31652A1652VgCggTg11B.1.5810.009434
ORF1ab/nsp31652A1652VgCggTg11B.1.617.20.000004
ORF1ab/nsp31652A1652VgCggTg11D.20.000075