CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1557del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31557A1557del2A2375del2delgCCg--980.8888897388-7390
ORF1ab/nsp31557A1557del2A2375del2delGCCA--910.1111117388-7390

Details of the mutation A1557del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31557A1557del2gCCg--89All0.000002
ORF1ab/nsp31557A1557del2GCCA--19All0
ORF1ab/nsp31557A1557del2gCCg--34B.1.1.70.000003
ORF1ab/nsp31557A1557del2GCCA--14B.1.1.70.000001
ORF1ab/nsp31557A1557del2gCCg--11AY.30.00001
ORF1ab/nsp31557A1557del2gCCg--11AY.40.000002
ORF1ab/nsp31557A1557del2gCCg--11AY.60.000041
ORF1ab/nsp31557A1557del2gCCg--11B0.000128
ORF1ab/nsp31557A1557del2gCCg--11B.1.2430.00007