CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1557T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31557A1557TA2375TnonsynGccAcc1006100617388-7390

Details of the mutation A1557T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31557A1557TGccAcc10061006All0.000192
ORF1ab/nsp31557A1557TGccAcc672672AY.40.001046
ORF1ab/nsp31557A1557TGccAcc6161AY.1030.000379
ORF1ab/nsp31557A1557TGccAcc3030B.1.617.20.000113
ORF1ab/nsp31557A1557TGccAcc2525B.1.1.70.000022
ORF1ab/nsp31557A1557TGccAcc2222B.1.20.000194
ORF1ab/nsp31557A1557TGccAcc1818B.10.000165
ORF1ab/nsp31557A1557TGccAcc1616AY.30.000159
ORF1ab/nsp31557A1557TGccAcc1515AY.430.000066
ORF1ab/nsp31557A1557TGccAcc1313AY.230.000907
ORF1ab/nsp31557A1557TGccAcc1212AY.440.000073
ORF1ab/nsp31557A1557TGccAcc88AY.1020.000212
ORF1ab/nsp31557A1557TGccAcc77AY.4.20.000152
ORF1ab/nsp31557A1557TGccAcc66AY.390.000148
ORF1ab/nsp31557A1557TGccAcc55AY.250.00003
ORF1ab/nsp31557A1557TGccAcc55AY.460.00052
ORF1ab/nsp31557A1557TGccAcc55B.1.5960.000436
ORF1ab/nsp31557A1557TGccAcc44AY.1000.000184
ORF1ab/nsp31557A1557TGccAcc44B.1.6370.000292
ORF1ab/nsp31557A1557TGccAcc33AY.260.000085
ORF1ab/nsp31557A1557TGccAcc33AY.46.40.000494
ORF1ab/nsp31557A1557TGccAcc33AY.50.000062
ORF1ab/nsp31557A1557TGccAcc33B.1.1.10.00098
ORF1ab/nsp31557A1557TGccAcc33B.1.1470.002268
ORF1ab/nsp31557A1557TGccAcc33P.10.000047
ORF1ab/nsp31557A1557TGccAcc22AY.1060.00067
ORF1ab/nsp31557A1557TGccAcc22AY.1100.000225
ORF1ab/nsp31557A1557TGccAcc22AY.1130.000285
ORF1ab/nsp31557A1557TGccAcc22AY.200.000078
ORF1ab/nsp31557A1557TGccAcc22AY.420.00008
ORF1ab/nsp31557A1557TGccAcc22AY.860.00166
ORF1ab/nsp31557A1557TGccAcc22AY.9.20.000073
ORF1ab/nsp31557A1557TGccAcc22B.1.1.370.000386
ORF1ab/nsp31557A1557TGccAcc22B.1.1.4090.005666
ORF1ab/nsp31557A1557TGccAcc22B.1.2100.004264
ORF1ab/nsp31557A1557TGccAcc22B.1.2400.000431
ORF1ab/nsp31557A1557TGccAcc22B.1.360.000292
ORF1ab/nsp31557A1557TGccAcc22B.6.60.001778
ORF1ab/nsp31557A1557TGccAcc22Q.10.000253
ORF1ab/nsp31557A1557TGccAcc11AY.10.000396
ORF1ab/nsp31557A1557TGccAcc11AY.120.000316
ORF1ab/nsp31557A1557TGccAcc11AY.1200.000037
ORF1ab/nsp31557A1557TGccAcc11AY.39.10.00004
ORF1ab/nsp31557A1557TGccAcc11AY.4.2.10.000149
ORF1ab/nsp31557A1557TGccAcc11AY.46.20.000635
ORF1ab/nsp31557A1557TGccAcc11AY.46.60.000072
ORF1ab/nsp31557A1557TGccAcc11AY.5.40.000277
ORF1ab/nsp31557A1557TGccAcc11AY.750.000056
ORF1ab/nsp31557A1557TGccAcc11AY.840.000437
ORF1ab/nsp31557A1557TGccAcc11AY.90.000068
ORF1ab/nsp31557A1557TGccAcc11AY.9.10.000084
ORF1ab/nsp31557A1557TGccAcc11AY.970.001701
ORF1ab/nsp31557A1557TGccAcc11AY.980.000079
ORF1ab/nsp31557A1557TGccAcc11B.1.10.000018
ORF1ab/nsp31557A1557TGccAcc11B.1.1.2220.000204
ORF1ab/nsp31557A1557TGccAcc11B.1.1.470.005348
ORF1ab/nsp31557A1557TGccAcc11B.1.1.5190.00004
ORF1ab/nsp31557A1557TGccAcc11B.1.1460.004237
ORF1ab/nsp31557A1557TGccAcc11B.1.1600.000031
ORF1ab/nsp31557A1557TGccAcc11B.1.160.290.004219
ORF1ab/nsp31557A1557TGccAcc11B.1.177.730.000566
ORF1ab/nsp31557A1557TGccAcc11B.1.2430.00007
ORF1ab/nsp31557A1557TGccAcc11B.1.258.140.00098
ORF1ab/nsp31557A1557TGccAcc11B.1.2740.011905
ORF1ab/nsp31557A1557TGccAcc11B.1.3510.00003
ORF1ab/nsp31557A1557TGccAcc11B.1.4160.001269
ORF1ab/nsp31557A1557TGccAcc11B.1.4560.003268
ORF1ab/nsp31557A1557TGccAcc11B.1.5950.000261
ORF1ab/nsp31557A1557TGccAcc11B.1.596.10.009346
ORF1ab/nsp31557A1557TGccAcc11B.1.6050.005952
ORF1ab/nsp31557A1557TGccAcc11B.60.00091