CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1527A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31527A1527AA2345AsyngcAgcG2051240.6048787298-7300
ORF1ab/nsp31527A1527AA2345AsyngcAgcT205690.3365857298-7300
ORF1ab/nsp31527A1527AA2345AsyngcAgcC205120.05853667298-7300

Details of the mutation A1527A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31527A1527AgcAgcG124205All0.000024
ORF1ab/nsp31527A1527AgcAgcT69205All0.000013
ORF1ab/nsp31527A1527AgcAgcC12205All0.000002
ORF1ab/nsp31527A1527AgcAgcG3142B.1.617.20.000117
ORF1ab/nsp31527A1527AgcAgcT1142B.1.617.20.000041
ORF1ab/nsp31527A1527AgcAgcT2429AY.40.000037
ORF1ab/nsp31527A1527AgcAgcG429AY.40.000006
ORF1ab/nsp31527A1527AgcAgcC129AY.40.000002
ORF1ab/nsp31527A1527AgcAgcG1821AY.440.00011
ORF1ab/nsp31527A1527AgcAgcT321AY.440.000018
ORF1ab/nsp31527A1527AgcAgcG1313AY.1030.000081
ORF1ab/nsp31527A1527AgcAgcG610B.1.1.70.000005
ORF1ab/nsp31527A1527AgcAgcT210B.1.1.70.000002
ORF1ab/nsp31527A1527AgcAgcC210B.1.1.70.000002
ORF1ab/nsp31527A1527AgcAgcG99B.1.2430.000626
ORF1ab/nsp31527A1527AgcAgcT88AY.1000.000368
ORF1ab/nsp31527A1527AgcAgcG24AY.250.000012
ORF1ab/nsp31527A1527AgcAgcT24AY.250.000012
ORF1ab/nsp31527A1527AgcAgcG44AY.590.002119
ORF1ab/nsp31527A1527AgcAgcT34P.10.000047
ORF1ab/nsp31527A1527AgcAgcG14P.10.000016
ORF1ab/nsp31527A1527AgcAgcG44Q.70.004444
ORF1ab/nsp31527A1527AgcAgcG13AY.30.00001
ORF1ab/nsp31527A1527AgcAgcC13AY.30.00001
ORF1ab/nsp31527A1527AgcAgcT13AY.30.00001
ORF1ab/nsp31527A1527AgcAgcT33AY.3.10.000256
ORF1ab/nsp31527A1527AgcAgcG33AY.39.10.000119
ORF1ab/nsp31527A1527AgcAgcG23B.10.000018
ORF1ab/nsp31527A1527AgcAgcC13B.10.000009
ORF1ab/nsp31527A1527AgcAgcC12AY.1020.000027
ORF1ab/nsp31527A1527AgcAgcT12AY.1020.000027
ORF1ab/nsp31527A1527AgcAgcG22AY.200.000078
ORF1ab/nsp31527A1527AgcAgcC12AY.290.000016
ORF1ab/nsp31527A1527AgcAgcG12AY.290.000016
ORF1ab/nsp31527A1527AgcAgcG22AY.4.20.000043
ORF1ab/nsp31527A1527AgcAgcG12AY.430.000004
ORF1ab/nsp31527A1527AgcAgcT12AY.430.000004
ORF1ab/nsp31527A1527AgcAgcG12B.1.10.000018
ORF1ab/nsp31527A1527AgcAgcC12B.1.10.000018
ORF1ab/nsp31527A1527AgcAgcT22B.1.1.390.001019
ORF1ab/nsp31527A1527AgcAgcG22B.1.20.000018
ORF1ab/nsp31527A1527AgcAgcG22B.1.4330.00639
ORF1ab/nsp31527A1527AgcAgcG22B.1.6210.000177
ORF1ab/nsp31527A1527AgcAgcG22B.1.6370.000146
ORF1ab/nsp31527A1527AgcAgcC110.055556
ORF1ab/nsp31527A1527AgcAgcG11A.2.40.003367
ORF1ab/nsp31527A1527AgcAgcG11AY.116.10.000311
ORF1ab/nsp31527A1527AgcAgcT11AY.1180.000063
ORF1ab/nsp31527A1527AgcAgcG11AY.230.00007
ORF1ab/nsp31527A1527AgcAgcG11AY.260.000028
ORF1ab/nsp31527A1527AgcAgcT11AY.330.000067
ORF1ab/nsp31527A1527AgcAgcG11AY.350.000233
ORF1ab/nsp31527A1527AgcAgcG11AY.46.60.000072
ORF1ab/nsp31527A1527AgcAgcT11AY.7.10.000113
ORF1ab/nsp31527A1527AgcAgcT11AY.840.000437
ORF1ab/nsp31527A1527AgcAgcT11AY.9.20.000037
ORF1ab/nsp31527A1527AgcAgcC11B.1.1.460.004367
ORF1ab/nsp31527A1527AgcAgcT11B.1.1600.000031
ORF1ab/nsp31527A1527AgcAgcG11B.1.177.690.001484
ORF1ab/nsp31527A1527AgcAgcT11B.1.2340.000132
ORF1ab/nsp31527A1527AgcAgcG11B.1.36.350.002604
ORF1ab/nsp31527A1527AgcAgcG11B.1.4000.000429
ORF1ab/nsp31527A1527AgcAgcC11B.1.5260.000024
ORF1ab/nsp31527A1527AgcAgcG11B.1.5650.00081
ORF1ab/nsp31527A1527AgcAgcT11D.20.000075
ORF1ab/nsp31527A1527AgcAgcC11K.10.02381
ORF1ab/nsp31527A1527AgcAgcG11R.10.00009