CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1526T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31526A1526TA2344TnonsynGctAct216421590.9976897295-7297
ORF1ab/nsp31526A1526TA2344TnonsynGcTAcA216450.002310547295-7297

Details of the mutation A1526T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31526A1526TGctAct21592164All0.000413
ORF1ab/nsp31526A1526TGcTAcA52164All0.000001
ORF1ab/nsp31526A1526TGctAct16631663B.1.1.70.001489
ORF1ab/nsp31526A1526TGctAct134134B.1.4290.003153
ORF1ab/nsp31526A1526TGctAct8383B.1.1.5180.525316
ORF1ab/nsp31526A1526TGctAct6161AY.40.000095
ORF1ab/nsp31526A1526TGctAct2626AY.1180.001629
ORF1ab/nsp31526A1526TGctAct2121AY.440.000128
ORF1ab/nsp31526A1526TGctAct2121B.1.1.4200.021127
ORF1ab/nsp31526A1526TGctAct1212B.10.00011
ORF1ab/nsp31526A1526TGctAct1212B.1.617.20.000045
ORF1ab/nsp31526A1526TGctAct1212Q.80.001979
ORF1ab/nsp31526A1526TGctAct99AY.30.00009
ORF1ab/nsp31526A1526TGctAct88B.1.2430.000557
ORF1ab/nsp31526A1526TGctAct77B.1.20.000062
ORF1ab/nsp31526A1526TGctAct66AY.60.000247
ORF1ab/nsp31526A1526TGcTAcA56P.1.160.001871
ORF1ab/nsp31526A1526TGctAct16P.1.160.000374
ORF1ab/nsp31526A1526TGctAct55B.1.1770.000066
ORF1ab/nsp31526A1526TGctAct55P.50.068493
ORF1ab/nsp31526A1526TGctAct44AD.2.10.181818
ORF1ab/nsp31526A1526TGctAct44AY.1020.000106
ORF1ab/nsp31526A1526TGctAct44AY.470.000124
ORF1ab/nsp31526A1526TGctAct33AY.1000.000138
ORF1ab/nsp31526A1526TGctAct33AY.250.000018
ORF1ab/nsp31526A1526TGctAct33AY.430.000013
ORF1ab/nsp31526A1526TGctAct33AY.98.10.000145
ORF1ab/nsp31526A1526TGctAct33B.1.10.000054
ORF1ab/nsp31526A1526TGctAct33B.1.1.2160.002671
ORF1ab/nsp31526A1526TGctAct33B.1.1.5190.000119
ORF1ab/nsp31526A1526TGctAct33B.1.2580.0002
ORF1ab/nsp31526A1526TGctAct33B.1.4160.003807
ORF1ab/nsp31526A1526TGctAct33P.20.00056
ORF1ab/nsp31526A1526TGctAct22AY.1190.000071
ORF1ab/nsp31526A1526TGctAct22AY.370.000632
ORF1ab/nsp31526A1526TGctAct22AY.640.00119
ORF1ab/nsp31526A1526TGctAct22B.1.1150.043478
ORF1ab/nsp31526A1526TGctAct22B.1.2400.000431
ORF1ab/nsp31526A1526TGctAct22P.10.000032
ORF1ab/nsp31526A1526TGctAct11A0.000387
ORF1ab/nsp31526A1526TGctAct11AY.1030.000006
ORF1ab/nsp31526A1526TGctAct11AY.300.000396
ORF1ab/nsp31526A1526TGctAct11AY.360.000148
ORF1ab/nsp31526A1526TGctAct11AY.420.00004
ORF1ab/nsp31526A1526TGctAct11AY.46.40.000165
ORF1ab/nsp31526A1526TGctAct11AY.5.30.000337
ORF1ab/nsp31526A1526TGctAct11AY.630.000387
ORF1ab/nsp31526A1526TGctAct11AY.99.10.001553
ORF1ab/nsp31526A1526TGctAct11B.1.1.3170.000412
ORF1ab/nsp31526A1526TGctAct11B.1.2150.009615
ORF1ab/nsp31526A1526TGctAct11B.1.2340.000132
ORF1ab/nsp31526A1526TGctAct11B.1.3510.00003
ORF1ab/nsp31526A1526TGctAct11B.1.351.20.000303
ORF1ab/nsp31526A1526TGctAct11B.1.4000.000429
ORF1ab/nsp31526A1526TGctAct11B.1.4090.000781
ORF1ab/nsp31526A1526TGctAct11B.1.466.20.000391
ORF1ab/nsp31526A1526TGctAct11B.1.6090.000479
ORF1ab/nsp31526A1526TGctAct11P.1.110.010204