CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1526S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31526A1526SA2344SnonsynGctTct4934910.9959437295-7297
ORF1ab/nsp31526A1526SA2344SnonsynGCtAGt49310.00202847295-7297
ORF1ab/nsp31526A1526SA2344SnonsynGcTTcG49310.00202847295-7297

Details of the mutation A1526S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31526A1526SGctTct491493All0.000094
ORF1ab/nsp31526A1526SGCtAGt1493All0
ORF1ab/nsp31526A1526SGcTTcG1493All0
ORF1ab/nsp31526A1526SGctTct157157AY.1000.007223
ORF1ab/nsp31526A1526SGctTct157157B.1.617.20.000591
ORF1ab/nsp31526A1526SGctTct3737B.1.1150.804348
ORF1ab/nsp31526A1526SGctTct1616AY.440.000097
ORF1ab/nsp31526A1526SGctTct1515B.1.1.70.000013
ORF1ab/nsp31526A1526SGctTct1212AY.40.000019
ORF1ab/nsp31526A1526SGctTct1010B.1.2340.001319
ORF1ab/nsp31526A1526SGctTct99B.10.000082
ORF1ab/nsp31526A1526SGctTct77AY.1020.000186
ORF1ab/nsp31526A1526SGctTct77AY.790.008475
ORF1ab/nsp31526A1526SGctTct66C.10.014354
ORF1ab/nsp31526A1526SGctTct55AY.1030.000031
ORF1ab/nsp31526A1526SGctTct44AY.230.000279
ORF1ab/nsp31526A1526SGctTct44AY.420.000161
ORF1ab/nsp31526A1526SGctTct33AY.30.00003
ORF1ab/nsp31526A1526SGctTct33B.40.006623
ORF1ab/nsp31526A1526SGctTct22AY.890.009804
ORF1ab/nsp31526A1526SGCtAGt12B.1.10.000018
ORF1ab/nsp31526A1526SGctTct12B.1.10.000018
ORF1ab/nsp31526A1526SGctTct22B.1.20.000018
ORF1ab/nsp31526A1526SGctTct22B.1.3110.000549
ORF1ab/nsp31526A1526SGctTct22C.360.001821
ORF1ab/nsp31526A1526SGctTct11A.20.000662
ORF1ab/nsp31526A1526SGctTct11A.2.20.001689
ORF1ab/nsp31526A1526SGctTct11AY.1190.000035
ORF1ab/nsp31526A1526SGctTct11AY.120.10.000321
ORF1ab/nsp31526A1526SGctTct11AY.140.000088
ORF1ab/nsp31526A1526SGctTct11AY.250.000006
ORF1ab/nsp31526A1526SGctTct11AY.290.000016
ORF1ab/nsp31526A1526SGctTct11AY.3.10.000085
ORF1ab/nsp31526A1526SGctTct11AY.330.000067
ORF1ab/nsp31526A1526SGctTct11AY.360.000148
ORF1ab/nsp31526A1526SGctTct11AY.390.000025
ORF1ab/nsp31526A1526SGctTct11AY.640.000595
ORF1ab/nsp31526A1526SGctTct11AY.690.000187
ORF1ab/nsp31526A1526SGctTct11AY.750.000056
ORF1ab/nsp31526A1526SGctTct11AY.9.20.000037
ORF1ab/nsp31526A1526SGcTTcG11AY.990.001049
ORF1ab/nsp31526A1526SGctTct11B.1.1600.000031
ORF1ab/nsp31526A1526SGctTct11B.1.1670.007812
ORF1ab/nsp31526A1526SGctTct11B.1.2580.000067
ORF1ab/nsp31526A1526SGctTct11B.1.3510.00003
ORF1ab/nsp31526A1526SGctTct11B.1.3620.001541
ORF1ab/nsp31526A1526SGctTct11B.1.3690.000285
ORF1ab/nsp31526A1526SGctTct11B.1.4270.00005
ORF1ab/nsp31526A1526SGctTct11B.1.4290.000024
ORF1ab/nsp31526A1526SGctTct11B.1.5900.004545
ORF1ab/nsp31526A1526SGctTct11B.1.6230.000536
ORF1ab/nsp31526A1526SGctTct11C.370.000116
ORF1ab/nsp31526A1526SGctTct11D.20.000075
ORF1ab/nsp31526A1526SGctTct11P.1.150.000232
ORF1ab/nsp31526A1526SGctTct11P.30.001595
ORF1ab/nsp31526A1526SGctTct11Q.80.000165