CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1512S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31512A1512SA2330SnonsynGcaTca2622600.9923667253-7255
ORF1ab/nsp31512A1512SA2330SnonsynGcATcC26210.003816797253-7255
ORF1ab/nsp31512A1512SA2330SnonsynGcATcG26210.003816797253-7255

Details of the mutation A1512S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31512A1512SGcaTca260262All0.00005
ORF1ab/nsp31512A1512SGcATcC1262All0
ORF1ab/nsp31512A1512SGcATcG1262All0
ORF1ab/nsp31512A1512SGcaTca108108AY.40.000168
ORF1ab/nsp31512A1512SGcaTca8989B.1.5910.946809
ORF1ab/nsp31512A1512SGcaTca1313B.1.617.20.000049
ORF1ab/nsp31512A1512SGcaTca77B.10.000064
ORF1ab/nsp31512A1512SGcaTca55AY.1030.000031
ORF1ab/nsp31512A1512SGcaTca130.055556
ORF1ab/nsp31512A1512SGcATcG130.055556
ORF1ab/nsp31512A1512SGcATcC130.055556
ORF1ab/nsp31512A1512SGcaTca33AY.440.000018
ORF1ab/nsp31512A1512SGcaTca22AY.420.00008
ORF1ab/nsp31512A1512SGcaTca22AY.700.000417
ORF1ab/nsp31512A1512SGcaTca22B.1.10.000036
ORF1ab/nsp31512A1512SGcaTca22B.1.5950.000522
ORF1ab/nsp31512A1512SGcaTca22P.10.000032
ORF1ab/nsp31512A1512SGcaTca11AY.1020.000027
ORF1ab/nsp31512A1512SGcaTca11AY.200.000039
ORF1ab/nsp31512A1512SGcaTca11AY.30.00001
ORF1ab/nsp31512A1512SGcaTca11AY.300.000396
ORF1ab/nsp31512A1512SGcaTca11AY.390.000025
ORF1ab/nsp31512A1512SGcaTca11AY.430.000004
ORF1ab/nsp31512A1512SGcaTca11AY.46.60.000072
ORF1ab/nsp31512A1512SGcaTca11AY.50.000021
ORF1ab/nsp31512A1512SGcaTca11AY.680.000274
ORF1ab/nsp31512A1512SGcaTca11AY.90.000068
ORF1ab/nsp31512A1512SGcaTca11AY.9.10.000084
ORF1ab/nsp31512A1512SGcaTca11AY.980.000079
ORF1ab/nsp31512A1512SGcaTca11B.1.1.370.000193
ORF1ab/nsp31512A1512SGcaTca11B.1.1.390.00051
ORF1ab/nsp31512A1512SGcaTca11B.1.1770.000013
ORF1ab/nsp31512A1512SGcaTca11B.1.177.50.001242
ORF1ab/nsp31512A1512SGcaTca11B.1.177.60.000977
ORF1ab/nsp31512A1512SGcaTca11B.1.20.000009
ORF1ab/nsp31512A1512SGcaTca11B.1.258.170.000104
ORF1ab/nsp31512A1512SGcaTca11B.1.3510.00003
ORF1ab/nsp31512A1512SGcaTca11B.1.5800.004065
ORF1ab/nsp31512A1512SGcaTca11C.360.000911
ORF1ab/nsp31512A1512SGcaTca11C.36.30.000567
ORF1ab/nsp31512A1512SGcaTca11P.1.10.000318